7BYF image
Deposition Date 2020-04-22
Release Date 2021-03-24
Last Version Date 2024-11-20
Entry Detail
PDB ID:
7BYF
Keywords:
Title:
The crystal structure of mouse ORF10-Rae1-Nup98 complex
Biological Source:
Source Organism:
Method Details:
Experimental Method:
Resolution:
2.50 Å
R-Value Free:
0.23
R-Value Work:
0.18
R-Value Observed:
0.18
Space Group:
C 1 2 1
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:mRNA export factor
Gene (Uniprot):Rae1
Chain IDs:A, E (auth: D)
Chain Length:347
Number of Molecules:2
Biological Source:Mus musculus
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Peptidase S59 domain-containing protein
Chain IDs:B, F (auth: E)
Chain Length:57
Number of Molecules:2
Biological Source:Mus musculus
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:10 protein
Gene (Uniprot):GAMMAHV.ORF10
Chain IDs:C (auth: F), D (auth: C)
Chain Length:418
Number of Molecules:2
Biological Source:Murid herpesvirus 4
Primary Citation
Molecular mechanism underlying selective inhibition of mRNA nuclear export by herpesvirus protein ORF10.
Proc.Natl.Acad.Sci.USA 117 26719 26727 (2020)
PMID: 33033226 DOI: 10.1073/pnas.2007774117

Abstact

Viruses employ multiple strategies to inhibit host mRNA nuclear export. Distinct to the generally nonselective inhibition mechanisms, ORF10 from gammaherpesviruses inhibits mRNA export in a transcript-selective manner by interacting with Rae1 (RNA export 1) and Nup98 (nucleoporin 98). We now report the structure of ORF10 from MHV-68 (murine gammaherpesvirus 68) bound to the Rae1-Nup98 heterodimer, thereby revealing detailed intermolecular interactions. Structural and functional assays highlight that two highly conserved residues of ORF10, L60 and M413, play critical roles in both complex assembly and mRNA export inhibition. Interestingly, although ORF10 occupies the RNA-binding groove of Rae1-Nup98, the ORF10-Rae1-Nup98 ternary complex still maintains a comparable RNA-binding ability due to the ORF10-RNA direct interaction. Moreover, mutations on the RNA-binding surface of ORF10 disrupt its function of mRNA export inhibition. Our work demonstrates the molecular mechanism of ORF10-mediated selective inhibition and provides insights into the functions of Rae1-Nup98 in regulating host mRNA export.

Legend

Protein

Chemical

Disease

Primary Citation of related structures