7BWD image
Deposition Date 2020-04-14
Release Date 2021-04-14
Last Version Date 2025-04-09
Entry Detail
PDB ID:
7BWD
Keywords:
TRANSLATION
Title:
Structure of Dot1L-H2BK34ub Nucleosome Complex
Biological Source:
Source Organism:
Homo sapiens (Taxon ID: 9606)
Host Organism:
Escherichia coli
Method Details:
Experimental Method:
ELECTRON MICROSCOPY
Resolution:
4.32 Å
Aggregation State:
PARTICLE
Reconstruction Method:
SINGLE PARTICLE
7BWD validation report
Macromolecular Entities
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Histone H3.1
Gene (Uniprot):H3C1, H3C2, H3C3, H3C4, H3C6, H3C7, H3C8, H3C10, H3C11, H3C12
Chain IDs:E, F (auth: A)
Chain Length:135
Number of Molecules:2
Biological Source:Homo sapiens
UniProt ID:P68431 Pfam ID:PF00125
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Histone H4
Gene (Uniprot):H4C1, H4C2, H4C3, H4C4, H4C5, H4C6, H4C8, H4C9, H4C11, H4C12, H4C13, H4C14, H4C15, H4C16
Chain IDs:B (auth: F), I (auth: B)
Chain Length:102
Number of Molecules:2
Biological Source:Homo sapiens
UniProt ID:P62805 Pfam ID:PF15511
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Histone H2A type 1-B/E
Gene (Uniprot):H2AC4, H2AC8
Chain IDs:C (auth: G), H (auth: C)
Chain Length:129
Number of Molecules:2
Biological Source:Homo sapiens
UniProt ID:P04908 Pfam ID:PF00125, PF16211
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Histone H2B type 1-K
Gene (Uniprot):H2BC12
Chain IDs:D (auth: H), G (auth: D)
Chain Length:125
Number of Molecules:2
Biological Source:Homo sapiens
UniProt ID:O60814 Pfam ID:PF00125
Polymer Type:polydeoxyribonucleotide
Molecule:DNA (146-MER)
Chain IDs:J (auth: I)
Chain Length:146
Number of Molecules:1
Biological Source:Homo sapiens
Polymer Type:polydeoxyribonucleotide
Molecule:DNA (146-MER)
Chain IDs:K (auth: J)
Chain Length:146
Number of Molecules:1
Biological Source:Homo sapiens
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Histone-lysine N-methyltransferase, H3 lysine-79 specific
Gene (Uniprot):DOT1L
Chain IDs:A (auth: K)
Chain Length:416
Number of Molecules:1
Biological Source:Homo sapiens
UniProt ID:Q8TEK3 Pfam ID:PF08123 EC:2.1.1.355
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Ubiquitin
Gene (Uniprot):RPS27A
Chain IDs:L, M
Chain Length:76
Number of Molecules:2
Biological Source:Homo sapiens
UniProt ID:P62979 Pfam ID:PF00240
Ligand Molecules
SAH
Primary Citation
Structure of the Dot1L-H2BK34ub Nucleosome Complex Reveals an Unprecedented Crosstalk Activation Mechanism through Nucleosome Shape Distortion
To Be Published ? ? ? (?)
Primary Citation of related structures
7BWD