7BW6 image
Deposition Date 2020-04-13
Release Date 2020-09-23
Last Version Date 2024-10-30
Entry Detail
PDB ID:
7BW6
Keywords:
Title:
Varicella-zoster virus capsid
Biological Source:
Source Organism:
Method Details:
Experimental Method:
Resolution:
3.70 Å
Aggregation State:
PARTICLE
Reconstruction Method:
SINGLE PARTICLE
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Major capsid protein
Gene (Uniprot):ORF40
Chain IDs:A, B, D, F, H, J, L, N, P, R, T, V, X, Z (auth: a), BA (auth: c), DA (auth: e)
Chain Length:1396
Number of Molecules:16
Biological Source:Human herpesvirus 3
Polymer Type:polypeptide(L)
Molecule:Small capsomere-interacting protein
Gene (Uniprot):ORF23
Chain IDs:C, E, G, I, K, M, O, Q, S, U, W, Y, AA (auth: b), CA (auth: d), EA (auth: f)
Chain Length:1396
Number of Molecules:15
Biological Source:Human herpesvirus 3
Polymer Type:polypeptide(L)
Molecule:Triplex capsid protein 2
Gene (Uniprot):ORF41
Chain IDs:FA (auth: g), GA (auth: h), IA (auth: j), JA (auth: k), LA (auth: m), MA (auth: n), OA (auth: p), PA (auth: q), RA (auth: s), SA (auth: t)
Chain Length:316
Number of Molecules:10
Biological Source:Human herpesvirus 3
Polymer Type:polypeptide(L)
Molecule:Triplex capsid protein 1
Gene (Uniprot):ORF20
Chain IDs:HA (auth: i), KA (auth: l), NA (auth: o), QA (auth: r), TA (auth: w)
Chain Length:235
Number of Molecules:5
Biological Source:Human herpesvirus 3
Ligand Molecules
Primary Citation
Cryo-EM structure of the varicella-zoster virus A-capsid.
Nat Commun 11 4795 4795 (2020)
PMID: 32963252 DOI: 10.1038/s41467-020-18537-y

Abstact

Varicella-zoster virus (VZV), a member of the Alphaherpesvirinae subfamily, causes severe diseases in humans of all ages. The viral capsids play critical roles in herpesvirus infection, making them potential antiviral targets. Here, we present the 3.7-Å-resolution structure of the VZV A-capsid and define the molecular determinants underpinning the assembly of this complicated viral machinery. Overall, the VZV capsid has a similar architecture to that of other known herpesviruses. The major capsid protein (MCP) assembles into pentons and hexons, forming extensive intra- and inter-capsomer interaction networks that are further secured by the small capsid protein (SCP) and the heterotriplex. The structure reveals a pocket beneath the floor of MCP that could potentially be targeted by antiviral inhibitors. In addition, we identified two alphaherpesvirus-specific structural features in SCP and Tri1 proteins. These observations highlight the divergence of different herpesviruses and provide an important basis for developing antiviral drugs.

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Primary Citation of related structures