ISDA: 7BJ1

Deposition Date 2021-01-13

Release Date 2021-03-03

Last Version Date 2024-01-31

Entry Detail

PDB ID:

7BJ1

Keywords:

ONCOPROTEIN

Title:

Crystal structure of SMYD3 with diperodon S enantiomer bound to allosteric site

Biological Source:

Source Organism:

Homo sapiens (Taxon ID: 9606)

Host Organism:

Escherichia coli BL21(DE3)

Method Details:

Experimental Method:

X-RAY DIFFRACTION

Resolution:

1.61 Å

R-Value Free:

0.21

R-Value Work:

0.17

R-Value Observed:

0.17

Space Group:

P 21 21 21

Download Validation Report

Macromolecular Entities

Structures with similar UniProt ID

Protein Blast

Polymer Type:polypeptide(L)
Molecule:Histone-lysine N-methyltransferase SMYD3
Gene (Uniprot):SMYD3
Mutagens:K13N, K140R
Chain IDs:A
Chain Length:431
Number of Molecules:1
Biological Source:Homo sapiens

UniProt ID:Q9H7B4 Pfam ID:PF00856, PF01753 EC:2.1.1.354

Ligand Molecules

ACT

GOL

QKT

SAM

Primary Citation

Discovery of an Allosteric Ligand Binding Site in SMYD3 Lysine Methyltransferase

Talibov, V.O, Fabini, E, FitzGerald, E.A, Tedesco, D, Cederfeldt, D, Talu, M.J, Rachman, M.M, Mihalic, F, Manoni, E, Naldi, M, Sanese, P, Forte, G, Barril, X, Simone, C, Bartolini, M, Dobritzsch, D, Danielson, U.H.Show

Chembiochem 22 1597 1608 (2021)

DOI: 10.1002/cbic.202000736

Primary Citation of related structures

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