7BFL image
Entry Detail
PDB ID:
7BFL
Keywords:
Title:
X-ray structure of SS-RNase-2 des116-120
Biological Source:
Source Organism:
PDB Version:
Deposition Date:
2021-01-04
Release Date:
2021-04-28
Method Details:
Experimental Method:
Resolution:
2.88 Å
R-Value Free:
0.30
R-Value Work:
0.25
R-Value Observed:
0.26
Space Group:
C 1 2 1
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:Angiogenin-1
Mutations:des116-120
Chain IDs:A, B, C, D
Chain Length:122
Number of Molecules:4
Biological Source:Salmo salar
Primary Citation
The structural features of an ancient ribonuclease from Salmo salar reveal an intriguing case of auto-inhibition.
Int.J.Biol.Macromol. 182 659 668 (2021)
PMID: 33848550 DOI: 10.1016/j.ijbiomac.2021.04.041

Abstact

The superfamily of vertebrate ribonucleases, a large group of evolutionarily related proteins, continues to provide interesting structural and functional information. In particular, the crystal structure of SS-RNase-2 from Salmo salar (SS2), here presented, has revealed a novel auto-inhibition mechanism that enriches the number of inhibition strategies observed in some members of the family. Within an essentially unmodified RNase folding, the SS2 active site cleft is in part obstructed by the collapse of an extra pentapeptide inserted in the C-terminal region. This unexpected intrusion alters the organization of the catalytic triad by pushing one catalytic histidine off the pocket. Possible mechanisms to remove the active site obstruction have also been studied through the production of two mutants that provide useful information on the functionality of this intriguing version of the ribonuclease superfamily.

Legend

Protein

Chemical

Disease

Primary Citation of related structures