7B5H image
Deposition Date 2020-12-03
Release Date 2022-02-23
Last Version Date 2024-11-13
Entry Detail
PDB ID:
7B5H
Title:
Cryo-EM structure of the contractile injection system base plate from Anabaena PCC7120
Biological Source:
Method Details:
Experimental Method:
Resolution:
3.20 Å
Aggregation State:
PARTICLE
Reconstruction Method:
SINGLE PARTICLE
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:All3314 protein
Gene (Uniprot):all3314
Chain IDs:A (auth: AA), B (auth: AB), C (auth: AC), R (auth: BA), S (auth: BB), T (auth: BC), GA (auth: CA), HA (auth: CB), IA (auth: CC), XA (auth: DA), YA (auth: DB), ZA (auth: DC), MB (auth: EA), NB (auth: EB), OB (auth: EC), DC (auth: FA), EC (auth: FB), FC
Chain Length:1476
Number of Molecules:18
Biological Source:Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576)
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:All3315 protein
Gene (Uniprot):all3315
Chain IDs:D (auth: AD), U (auth: BD), JA (auth: CD), AB (auth: DD), PB (auth: ED), GC (auth: FD)
Chain Length:1335
Number of Molecules:6
Biological Source:Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576)
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:All3316 protein
Gene (Uniprot):all3316
Chain IDs:E (auth: AE), F (auth: AF), G (auth: AG), V (auth: BE), W (auth: BF), X (auth: BG), KA (auth: CE), LA (auth: CF), MA (auth: CG), BB (auth: DE), CB (auth: DF), DB (auth: DG), QB (auth: EE), RB (auth: EF), SB (auth: EG), HC (auth: FE), IC (auth: FF), JC (auth: FG)
Chain Length:154
Number of Molecules:18
Biological Source:Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576)
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:All3317 protein
Gene (Uniprot):all3317
Chain IDs:H (auth: AH), Y (auth: BH), NA (auth: CH), EB (auth: DH), TB (auth: EH), KC (auth: FH)
Chain Length:1231
Number of Molecules:6
Biological Source:Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576)
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:All3318 protein
Gene (Uniprot):all3318
Chain IDs:K (auth: AI), Z (auth: BI), QA (auth: CI), FB (auth: DI), WB (auth: EI), LC (auth: FI)
Chain Length:149
Number of Molecules:6
Biological Source:Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576)
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:All3320 protein
Gene (Uniprot):all3320
Chain IDs:I (auth: AJ), OA (auth: CJ), UB (auth: EJ)
Chain Length:589
Number of Molecules:3
Biological Source:Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576)
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:All3321 protein
Gene (Uniprot):all3321
Chain IDs:L (auth: AK), AA (auth: BK), RA (auth: CK), GB (auth: DK), XB (auth: EK), MC (auth: FK)
Chain Length:234
Number of Molecules:6
Biological Source:Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576)
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Asl3322 protein
Gene (Uniprot):asl3322
Chain IDs:J (auth: AL), PA (auth: CL), VB (auth: EL)
Chain Length:50
Number of Molecules:3
Biological Source:Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576)
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:All3323 protein
Gene (Uniprot):all3323
Chain IDs:M (auth: AM), BA (auth: BM), SA (auth: CM), HB (auth: DM), YB (auth: EM), NC (auth: FM)
Chain Length:167
Number of Molecules:6
Biological Source:Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576)
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:All3324 protein
Gene (Uniprot):all3324
Chain IDs:N (auth: AN), CA (auth: BN), TA (auth: CN), IB (auth: DN), ZB (auth: EN), OC (auth: FN)
Chain Length:143
Number of Molecules:6
Biological Source:Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576)
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:All3325 protein
Gene (Uniprot):all3325
Chain IDs:O (auth: AO), P (auth: AP), Q (auth: AQ), DA (auth: BO), EA (auth: BP), FA (auth: BQ), UA (auth: CO), VA (auth: CP), WA (auth: CQ), JB (auth: DO), KB (auth: DP), LB (auth: DQ), AC (auth: EO), BC (auth: EP), CC (auth: EQ), PC (auth: FO), QC (auth: FP), RC (auth: FQ)
Chain Length:484
Number of Molecules:18
Biological Source:Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576)
Ligand Molecules
Primary Citation
Structure of a thylakoid-anchored contractile injection system in multicellular cyanobacteria.
Nat Microbiol 7 386 396 (2022)
PMID: 35165386 DOI: 10.1038/s41564-021-01055-y

Abstact

Contractile injection systems (CISs) mediate cell-cell interactions by phage tail-like structures, using two distinct modes of action: extracellular CISs are released into the medium, while type 6 secretion systems (T6SSs) are attached to the cytoplasmic membrane and function upon cell-cell contact. Here, we characterized a CIS in the multicellular cyanobacterium Anabaena, with features distinct from extracellular CISs and T6SSs. Cryo-electron tomography of focused ion beam-milled cells revealed that CISs were anchored in thylakoid membrane stacks, facing the cell periphery. Single particle cryo-electron microscopy showed that this unique in situ localization was mediated by extensions of tail fibre and baseplate components. On stress, cyanobacteria induced the formation of ghost cells, presenting thylakoid-anchored CISs to the environment. Functional assays suggest that these CISs may mediate ghost cell formation and/or interactions of ghost cells with other organisms. Collectively, these data provide a framework for understanding the evolutionary re-engineering of CISs and potential roles of these CISs in cyanobacterial programmed cell death.

Legend

Protein

Chemical

Disease

Primary Citation of related structures