7B43 image
Deposition Date 2020-12-02
Release Date 2020-12-09
Last Version Date 2024-05-01
Entry Detail
PDB ID:
7B43
Keywords:
Title:
Crystal structure of c-MET bound by compound 9
Biological Source:
Source Organism:
Homo sapiens (Taxon ID: 9606)
Host Organism:
Method Details:
Experimental Method:
Resolution:
1.87 Å
R-Value Free:
0.24
R-Value Work:
0.20
R-Value Observed:
0.20
Space Group:
P 1
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Hepatocyte growth factor receptor
Gene (Uniprot):MET
Chain IDs:A, B
Chain Length:299
Number of Molecules:2
Biological Source:Homo sapiens
Ligand Molecules
Primary Citation
Structural Basis for Targeting the Folded P-Loop Conformation of c-MET.
Acs Med.Chem.Lett. 12 162 167 (2021)
PMID: 33488978 DOI: 10.1021/acsmedchemlett.0c00392

Abstact

We report here a fragment screen directed toward the c-MET kinase from which we discovered a series of inhibitors able to bind to a rare conformation of the protein in which the P-loop adopts a collapsed, or folded, arrangement. Preliminary SAR exploration led to an inhibitor (7) with nanomolar biochemical activity against c-MET and promising cell activity and kinase selectivity. These findings increase our structural understanding of the folded P-loop conformation of c-MET and provide a sound structural and chemical basis for further investigation of this underexplored yet potentially therapeutically exploitable conformational state.

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Primary Citation of related structures