7AST image
Deposition Date 2020-10-28
Release Date 2020-12-23
Last Version Date 2024-11-06
Entry Detail
PDB ID:
7AST
Keywords:
Title:
Apo Human RNA Polymerase III
Biological Source:
Source Organism:
Homo sapiens (Taxon ID: 9606)
Method Details:
Experimental Method:
Resolution:
4.00 Å
Aggregation State:
PARTICLE
Reconstruction Method:
SINGLE PARTICLE
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:DNA-directed RNA polymerase III subunit RPC10
Gene (Uniprot):POLR3K
Chain IDs:B (auth: A)
Chain Length:108
Number of Molecules:1
Biological Source:Homo sapiens
Polymer Type:polypeptide(L)
Molecule:DNA-directed RNA polymerases I, II, and III subunit RPABC5
Gene (Uniprot):POLR2L
Chain IDs:C (auth: B)
Chain Length:67
Number of Molecules:1
Biological Source:Homo sapiens
Polymer Type:polypeptide(L)
Molecule:DNA-directed RNA polymerases I, II, and III subunit RPABC4
Gene (Uniprot):POLR2K
Chain IDs:D (auth: C)
Chain Length:58
Number of Molecules:1
Biological Source:Homo sapiens
Polymer Type:polypeptide(L)
Molecule:DNA-directed RNA polymerases I, II, and III subunit RPABC3
Gene (Uniprot):POLR2H
Chain IDs:E (auth: D)
Chain Length:150
Number of Molecules:1
Biological Source:Homo sapiens
Polymer Type:polypeptide(L)
Molecule:DNA-directed RNA polymerases I, II, and III subunit RPABC2
Gene (Uniprot):POLR2F
Chain IDs:F (auth: E)
Chain Length:127
Number of Molecules:1
Biological Source:Homo sapiens
Polymer Type:polypeptide(L)
Molecule:DNA-directed RNA polymerases I, II, and III subunit RPABC1
Gene (Uniprot):POLR2E
Chain IDs:G (auth: F)
Chain Length:210
Number of Molecules:1
Biological Source:Homo sapiens
Polymer Type:polypeptide(L)
Molecule:DNA-directed RNA polymerases I and III subunit RPAC2
Gene (Uniprot):POLR1D
Chain IDs:H (auth: G)
Chain Length:133
Number of Molecules:1
Biological Source:Homo sapiens
Polymer Type:polypeptide(L)
Molecule:DNA-directed RNA polymerases I and III subunit RPAC1
Gene (Uniprot):POLR1C
Chain IDs:I (auth: H)
Chain Length:346
Number of Molecules:1
Biological Source:Homo sapiens
Polymer Type:polypeptide(L)
Molecule:DNA-directed RNA polymerase III subunit RPC9
Gene (Uniprot):CRCP
Chain IDs:J (auth: I)
Chain Length:148
Number of Molecules:1
Biological Source:Homo sapiens
Polymer Type:polypeptide(L)
Molecule:DNA-directed RNA polymerase III subunit RPC8
Gene (Uniprot):POLR3H
Chain IDs:K (auth: J)
Chain Length:204
Number of Molecules:1
Biological Source:Homo sapiens
Polymer Type:polypeptide(L)
Molecule:DNA-directed RNA polymerase III subunit RPC5
Gene (Uniprot):POLR3E
Chain IDs:L (auth: K)
Chain Length:708
Number of Molecules:1
Biological Source:Homo sapiens
Polymer Type:polypeptide(L)
Molecule:DNA-directed RNA polymerase III subunit RPC4
Gene (Uniprot):POLR3D
Chain IDs:M (auth: L)
Chain Length:398
Number of Molecules:1
Biological Source:Homo sapiens
Polymer Type:polypeptide(L)
Molecule:DNA-directed RNA polymerase III subunit RPC2
Gene (Uniprot):POLR3B
Chain IDs:N (auth: M)
Chain Length:1133
Number of Molecules:1
Biological Source:Homo sapiens
Polymer Type:polypeptide(L)
Molecule:DNA-directed RNA polymerase III subunit RPC1
Gene (Uniprot):POLR3A
Chain IDs:A (auth: N)
Chain Length:1390
Number of Molecules:1
Biological Source:Homo sapiens
Polymer Type:polypeptide(L)
Molecule:DNA-directed RNA polymerase III subunit RPC3
Gene (Uniprot):POLR3C
Chain IDs:P (auth: X)
Chain Length:534
Number of Molecules:1
Biological Source:Homo sapiens
Polymer Type:polypeptide(L)
Molecule:DNA-directed RNA polymerase III subunit RPC7-beta
Chain IDs:Q (auth: Y)
Chain Length:36
Number of Molecules:1
Biological Source:Homo sapiens
Polymer Type:polypeptide(L)
Molecule:DNA-directed RNA polymerase III subunit RPC6
Gene (Uniprot):POLR3F
Chain IDs:O (auth: Z)
Chain Length:316
Number of Molecules:1
Biological Source:Homo sapiens
Ligand Molecules
Primary Citation
Structure of human RNA polymerase III.
Nat Commun 11 6409 6409 (2020)
PMID: 33335104 DOI: 10.1038/s41467-020-20262-5

Abstact

In eukaryotes, RNA Polymerase (Pol) III is specialized for the transcription of tRNAs and other short, untranslated RNAs. Pol III is a determinant of cellular growth and lifespan across eukaryotes. Upregulation of Pol III transcription is observed in cancer and causative Pol III mutations have been described in neurodevelopmental disorders and hypersensitivity to viral infection. Here, we report a cryo-EM reconstruction at 4.0 Å of human Pol III, allowing mapping and rationalization of reported genetic mutations. Mutations causing neurodevelopmental defects cluster in hotspots affecting Pol III stability and/or biogenesis, whereas mutations affecting viral sensing are located in proximity to DNA binding regions, suggesting an impairment of Pol III cytosolic viral DNA-sensing. Integrating x-ray crystallography and SAXS, we also describe the structure of the higher eukaryote specific RPC5 C-terminal extension. Surprisingly, experiments in living cells highlight a role for this module in the assembly and stability of human Pol III.

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