ISDA

Entry Detail

PDB ID:

7ASM

EMDB ID:

EMD-11900

Keywords:

RIBOSOME

Title:

Staphylococcus aureus 50S after 30 minutes incubation at 37C

Biological Source:

Source Organism:

Staphylococcus aureus

Host Organism:

Staphylococcus aureus

PDB Version:

Deposition Date:

2020-10-27

Release Date:

2021-11-17

Method Details:

Experimental Method:

ELECTRON MICROSCOPY

Resolution:

2.48 Å

Aggregation State:

PARTICLE

Reconstruction Method:

SINGLE PARTICLE

Download Validation Report

Macromolecular Entities

Protein Blast

Polymer Type:polypeptide(L)
Description:50S ribosomal protein L33
Chain IDs:S (auth: 1)
Chain Length:47
Number of Molecules:1
Biological Source:Staphylococcus aureus

UniProt ID:Q2FYU6 Pfam ID:PF00471

Protein Blast

Polymer Type:polypeptide(L)
Description:50S ribosomal protein L34
Chain IDs:T (auth: 2)
Chain Length:43
Number of Molecules:1
Biological Source:Staphylococcus aureus

UniProt ID:Q2FUQ0 Pfam ID:PF00468

Protein Blast

Polymer Type:polypeptide(L)
Description:50S ribosomal protein L35
Chain IDs:R (auth: 3)
Chain Length:64
Number of Molecules:1
Biological Source:Staphylococcus aureus

UniProt ID:Q2FXQ0 Pfam ID:PF01632

Protein Blast

Polymer Type:polypeptide(L)
Description:50S ribosomal protein L36
Chain IDs:U (auth: 4)
Chain Length:37
Number of Molecules:1
Biological Source:Staphylococcus aureus

UniProt ID:Q2FW29 Pfam ID:PF00444

Polymer Type:polyribonucleotide
Description:23S rRNA
Chain IDs:C (auth: A)
Chain Length:2923
Number of Molecules:1
Biological Source:Staphylococcus aureus

Polymer Type:polyribonucleotide
Description:5S rRNA
Chain IDs:D (auth: B)
Chain Length:115
Number of Molecules:1
Biological Source:Staphylococcus aureus

Protein Blast

Polymer Type:polypeptide(L)
Description:50S ribosomal protein L2
Chain IDs:E (auth: C)
Chain Length:274
Number of Molecules:1
Biological Source:Staphylococcus aureus

UniProt ID:P60430 Pfam ID:PF00181, PF03947

Protein Blast

Polymer Type:polypeptide(L)
Description:50S ribosomal protein L3
Chain IDs:V (auth: D)
Chain Length:215
Number of Molecules:1
Biological Source:Staphylococcus aureus

UniProt ID:Q2FW06 Pfam ID:PF00297

Protein Blast

Polymer Type:polypeptide(L)
Description:50S ribosomal protein L4
Chain IDs:B (auth: E)
Chain Length:206
Number of Molecules:1
Biological Source:Staphylococcus aureus

UniProt ID:Q2FW07 Pfam ID:PF00573

Protein Blast

Polymer Type:polypeptide(L)
Description:50S ribosomal protein L5
Chain IDs:W (auth: F)
Chain Length:158
Number of Molecules:1
Biological Source:Staphylococcus aureus

UniProt ID:Q2FW18 Pfam ID:PF00281, PF00673

Protein Blast

Polymer Type:polypeptide(L)
Description:50S ribosomal protein L6
Chain IDs:F (auth: G)
Chain Length:175
Number of Molecules:1
Biological Source:Staphylococcus aureus

UniProt ID:Q2FW21 Pfam ID:PF00347

Protein Blast

Polymer Type:polypeptide(L)
Description:50S ribosomal protein L13
Chain IDs:G (auth: H)
Chain Length:145
Number of Molecules:1
Biological Source:Staphylococcus aureus

UniProt ID:Q2FW38 Pfam ID:PF00572

Protein Blast

Polymer Type:polypeptide(L)
Description:50S ribosomal protein L14
Chain IDs:X (auth: I)
Chain Length:122
Number of Molecules:1
Biological Source:Staphylococcus aureus

UniProt ID:Q2FW16 Pfam ID:PF00238

Protein Blast

Polymer Type:polypeptide(L)
Description:50S ribosomal protein L15
Chain IDs:H (auth: J)
Chain Length:146
Number of Molecules:1
Biological Source:Staphylococcus aureus

UniProt ID:P0A0F8 Pfam ID:PF00828

Protein Blast

Polymer Type:polypeptide(L)
Description:50S ribosomal protein L16
Chain IDs:I (auth: K)
Chain Length:137
Number of Molecules:1
Biological Source:Staphylococcus aureus

UniProt ID:Q2FW13 Pfam ID:PF00252

Protein Blast

Polymer Type:polypeptide(L)
Description:50S ribosomal protein L17
Chain IDs:CA (auth: L)
Chain Length:120
Number of Molecules:1
Biological Source:Staphylococcus aureus

UniProt ID:Q2FW33 Pfam ID:PF01196

Protein Blast

Polymer Type:polypeptide(L)
Description:50S ribosomal protein L18
Chain IDs:J (auth: M)
Chain Length:119
Number of Molecules:1
Biological Source:Staphylococcus aureus

UniProt ID:Q2FW22 Pfam ID:PF00861

Protein Blast

Polymer Type:polypeptide(L)
Description:50S ribosomal protein L19
Chain IDs:A (auth: N)
Chain Length:114
Number of Molecules:1
Biological Source:Staphylococcus aureus

UniProt ID:Q2FZ42 Pfam ID:PF01245

Protein Blast

Polymer Type:polypeptide(L)
Description:50S ribosomal protein L20
Chain IDs:K (auth: O)
Chain Length:116
Number of Molecules:1
Biological Source:Staphylococcus aureus

UniProt ID:Q2FXQ1 Pfam ID:PF00453

Protein Blast

Polymer Type:polypeptide(L)
Description:50S ribosomal protein L21
Chain IDs:L (auth: P)
Chain Length:102
Number of Molecules:1
Biological Source:Staphylococcus aureus

UniProt ID:Q2FXS8 Pfam ID:PF00829

Protein Blast

Polymer Type:polypeptide(L)
Description:50S ribosomal protein L22
Chain IDs:Y (auth: Q)
Chain Length:112
Number of Molecules:1
Biological Source:Staphylococcus aureus

UniProt ID:Q2FW11 Pfam ID:PF00237

Protein Blast

Polymer Type:polypeptide(L)
Description:50S ribosomal protein L23
Chain IDs:M (auth: R)
Chain Length:89
Number of Molecules:1
Biological Source:Staphylococcus aureus

UniProt ID:Q2FW08 Pfam ID:PF00276

Protein Blast

Polymer Type:polypeptide(L)
Description:50S ribosomal protein L24
Chain IDs:N (auth: S)
Chain Length:104
Number of Molecules:1
Biological Source:Staphylococcus aureus

UniProt ID:Q2FW17 Pfam ID:PF00467, PF17136

Protein Blast

Polymer Type:polypeptide(L)
Description:50S ribosomal protein L25
Chain IDs:O (auth: T)
Chain Length:94
Number of Molecules:1
Biological Source:Staphylococcus aureus

UniProt ID:Q2FJE0 Pfam ID:PF01386

Protein Blast

Polymer Type:polypeptide(L)
Description:50S ribosomal protein L27
Chain IDs:P (auth: U)
Chain Length:79
Number of Molecules:1
Biological Source:Staphylococcus aureus

UniProt ID:Q2FXT0 Pfam ID:PF01016

Protein Blast

Polymer Type:polypeptide(L)
Description:50S ribosomal protein L28
Chain IDs:Z (auth: V)
Chain Length:49
Number of Molecules:1
Biological Source:Staphylococcus aureus

UniProt ID:Q2FZ60 Pfam ID:PF00830

Protein Blast

Polymer Type:polypeptide(L)
Description:50S ribosomal protein L29
Chain IDs:Q (auth: W)
Chain Length:67
Number of Molecules:1
Biological Source:Staphylococcus aureus

UniProt ID:Q2FW14 Pfam ID:PF00831

Protein Blast

Polymer Type:polypeptide(L)
Description:50S ribosomal protein L30
Chain IDs:AA (auth: X)
Chain Length:58
Number of Molecules:1
Biological Source:Staphylococcus aureus

UniProt ID:P0A0G2 Pfam ID:PF00327

Protein Blast

Polymer Type:polypeptide(L)
Description:50S ribosomal protein L32
Chain IDs:BA (auth: Z)
Chain Length:48
Number of Molecules:1
Biological Source:Staphylococcus aureus

UniProt ID:Q2FZF1 Pfam ID:PF01783

Ligand Molecules

Primary Citation

Staphylococcus aureus 50S after 30 minutes incubation a 37C

Cimicata, G, Bashan, A, Yonath, A.Show

To Be Published ? ? ? (?)

Primary Citation of related structures