7ARO image
Deposition Date 2020-10-25
Release Date 2021-04-07
Last Version Date 2024-11-13
Entry Detail
PDB ID:
7ARO
Title:
Crystal structure of the non-ribose partial agonist LUF5833 bound to the adenosine A2A receptor
Biological Source:
Source Organism:
Homo sapiens (Taxon ID: 9606)
Escherichia coli (Taxon ID: 562)
Host Organism:
Method Details:
Experimental Method:
Resolution:
3.12 Å
R-Value Free:
0.25
R-Value Work:
0.22
R-Value Observed:
0.22
Space Group:
C 2 2 21
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Adenosine receptor A2a,Soluble cytochrome b562,Adenosine receptor A2a
Gene (Uniprot):cybC, ADORA2A
Chain IDs:A
Chain Length:433
Number of Molecules:1
Biological Source:Homo sapiens, Escherichia coli
Primary Citation
Crystal Structure and Subsequent Ligand Design of a Nonriboside Partial Agonist Bound to the Adenosine A 2A Receptor.
J.Med.Chem. 64 3827 3842 (2021)
PMID: 33764785 DOI: 10.1021/acs.jmedchem.0c01856

Abstact

In this study, we determined the crystal structure of an engineered human adenosine A2A receptor bound to a partial agonist and compared it to structures cocrystallized with either a full agonist or an antagonist/inverse agonist. The interaction between the partial agonist, belonging to a class of dicyanopyridines, and amino acids in the ligand binding pocket inspired us to develop a small library of derivatives and assess their affinity in radioligand binding studies and potency and intrinsic activity in a functional, label-free, intact cell assay. It appeared that some of the derivatives retained the partial agonist profile, whereas other ligands turned into inverse agonists. We rationalized this remarkable behavior with additional computational docking studies.

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