7ALO image
Deposition Date 2020-10-07
Release Date 2021-06-16
Last Version Date 2024-10-16
Entry Detail
PDB ID:
7ALO
Keywords:
Title:
Structure of B*27:09/photoRL9
Biological Source:
Source Organism:
Homo sapiens (Taxon ID: 9606)
Method Details:
Experimental Method:
Resolution:
1.80 Å
R-Value Free:
0.26
R-Value Work:
0.22
R-Value Observed:
0.22
Space Group:
P 1
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Lymphocyte antigen HLA-B27
Gene (Uniprot):HLA-B
Chain IDs:A, D
Chain Length:292
Number of Molecules:2
Biological Source:Homo sapiens
Polymer Type:polypeptide(L)
Molecule:Beta-2-microglobulin
Gene (Uniprot):B2M
Chain IDs:B, E
Chain Length:100
Number of Molecules:2
Biological Source:Homo sapiens
Polymer Type:polypeptide(L)
Molecule:Vasoactive intestinal polypeptide receptor 1
Gene (Uniprot):VIPR1
Chain IDs:C, F
Chain Length:9
Number of Molecules:2
Biological Source:Homo sapiens
Primary Citation
Exchange catalysis by tapasin exploits conserved and allele-specific features of MHC-I molecules.
Nat Commun 12 4236 4236 (2021)
PMID: 34244493 DOI: 10.1038/s41467-021-24401-4

Abstact

The repertoire of peptides presented by major histocompatibility complex class I (MHC-I) molecules on the cell surface is tailored by the ER-resident peptide loading complex (PLC), which contains the exchange catalyst tapasin. Tapasin stabilizes MHC-I molecules and promotes the formation of stable peptide-MHC-I (pMHC-I) complexes that serve as T cell antigens. Exchange of suboptimal by high-affinity ligands is catalyzed by tapasin, but the underlying mechanism is still elusive. Here we analyze the tapasin-induced changes in MHC-I dynamics, and find the catalyst to exploit two essential features of MHC-I. First, tapasin recognizes a conserved allosteric site underneath the α2-1-helix of MHC-I, 'loosening' the MHC-I F-pocket region that accomodates the C-terminus of the peptide. Second, the scoop loop11-20 of tapasin relies on residue L18 to target the MHC-I F-pocket, enabling peptide exchange. Meanwhile, tapasin residue K16 plays an accessory role in catalysis of MHC-I allotypes bearing an acidic F-pocket. Thus, our results provide an explanation for the observed allele-specificity of catalyzed peptide exchange.

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