7AL3 image
Deposition Date 2020-10-04
Release Date 2021-02-10
Last Version Date 2024-05-01
Entry Detail
PDB ID:
7AL3
Keywords:
Title:
Native-like genome-containing particle of DWV in acidic pH
Biological Source:
Source Organism:
Host Organism:
Method Details:
Experimental Method:
Resolution:
4.80 Å
Aggregation State:
PARTICLE
Reconstruction Method:
SINGLE PARTICLE
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Genome polyprotein
Chain IDs:A
Chain Length:258
Number of Molecules:1
Biological Source:Deformed wing virus
Polymer Type:polypeptide(L)
Molecule:Genome polyprotein
Chain IDs:B
Chain Length:253
Number of Molecules:1
Biological Source:Deformed wing virus
Polymer Type:polypeptide(L)
Molecule:Genome polyprotein
Chain IDs:C
Chain Length:416
Number of Molecules:1
Biological Source:Deformed wing virus
Ligand Molecules
Primary Citation
Capsid opening enables genome release of iflaviruses.
Sci Adv 7 ? ? (2021)
PMID: 33523856 DOI: 10.1126/sciadv.abd7130

Abstact

The family Iflaviridae includes economically important viruses of the western honeybee such as deformed wing virus, slow bee paralysis virus, and sacbrood virus. Iflaviruses have nonenveloped virions and capsids organized with icosahedral symmetry. The genome release of iflaviruses can be induced in vitro by exposure to acidic pH, implying that they enter cells by endocytosis. Genome release intermediates of iflaviruses have not been structurally characterized. Here, we show that conformational changes and expansion of iflavirus RNA genomes, which are induced by acidic pH, trigger the opening of iflavirus particles. Capsids of slow bee paralysis virus and sacbrood virus crack into pieces. In contrast, capsids of deformed wing virus are more flexible and open like flowers to release their genomes. The large openings in iflavirus particles enable the fast exit of genomes from capsids, which decreases the probability of genome degradation by the RNases present in endosomes.

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Primary Citation of related structures