7AIZ image
Entry Detail
PDB ID:
7AIZ
Keywords:
Title:
Vanadium nitrogenase VFe protein, high CO state
Biological Source:
Source Organism:
Host Organism:
PDB Version:
Deposition Date:
2020-09-28
Release Date:
2021-06-09
Method Details:
Experimental Method:
Resolution:
1.05 Å
R-Value Free:
0.14
R-Value Work:
0.12
R-Value Observed:
0.12
Space Group:
P 1
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:Nitrogenase vanadium-iron protein alpha chain
Chain IDs:A, D
Chain Length:474
Number of Molecules:2
Biological Source:Azotobacter vinelandii
Polymer Type:polypeptide(L)
Description:Nitrogenase vanadium-iron protein beta chain
Chain IDs:B, E
Chain Length:475
Number of Molecules:2
Biological Source:Azotobacter vinelandii
Polymer Type:polypeptide(L)
Description:Nitrogenase vanadium-iron protein delta chain
Chain IDs:C, F
Chain Length:113
Number of Molecules:2
Biological Source:Azotobacter vinelandii
Primary Citation
Two ligand-binding sites in CO-reducing V nitrogenase reveal a general mechanistic principle.
Sci Adv 7 ? ? (2021)
PMID: 34049880 DOI: 10.1126/sciadv.abg4474

Abstact

Besides its role in biological nitrogen fixation, vanadium-containing nitrogenase also reduces carbon monoxide (CO) to hydrocarbons, in analogy to the industrial Fischer-Tropsch process. The protein yields 93% of ethylene (C2H4), implying a C-C coupling step that mandates the simultaneous binding of two CO at the active site FeV cofactor. Spectroscopic data indicated multiple CO binding events, but structural analyses of Mo and V nitrogenase only confirmed a single site. Here, we report the structure of a two CO-bound state of V nitrogenase at 1.05 Å resolution, with one μ-bridging and one terminal CO molecule. This additional, specific ligand binding site suggests a mechanistic route for CO reduction and hydrocarbon formation, as well as a second access pathway for protons required during the reaction. Moreover, carbonyls are strong-field ligands that are chemically similar to mechanistically relevant hydrides that may be formed and used in a fully analogous fashion.

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