7A62 image
Deposition Date 2020-08-24
Release Date 2020-12-16
Last Version Date 2024-01-31
Entry Detail
PDB ID:
7A62
Keywords:
Title:
Structure of human indoleamine-2,3-dioxygenase 1 (hIDO1) with a complete JK loop
Biological Source:
Source Organism:
Homo sapiens (Taxon ID: 9606)
Method Details:
Experimental Method:
Resolution:
2.44 Å
R-Value Free:
0.25
R-Value Work:
0.21
R-Value Observed:
0.21
Space Group:
P 21 21 2
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Indoleamine 2,3-dioxygenase 1
Gene (Uniprot):IDO1
Mutations:K116A, K117A
Chain IDs:A, B, C, D
Chain Length:405
Number of Molecules:4
Biological Source:Homo sapiens
Primary Citation
Influence of the presence of the heme cofactor on the JK-loop structure in indoleamine 2,3-dioxygenase 1.
Acta Crystallogr D Struct Biol 76 1211 1221 (2020)
PMID: 33263327 DOI: 10.1107/S2059798320013510

Abstact

Indoleamine 2,3-dioxygenase 1 has sparked interest as an immunotherapeutic target in cancer research. Its structure includes a loop, named the JK-loop, that controls the orientation of the substrate or inhibitor within the active site. However, little has been reported about the crystal structure of this loop. In the present work, the conformation of the JK-loop is determined for the first time in the presence of the heme cofactor in the active site through X-ray diffraction experiments (2.44 Å resolution). Molecular-dynamics trajectories were also obtained to provide dynamic information about the loop according to the presence of cofactor. This new structural and dynamic information highlights the importance of the JK-loop in confining the labile heme cofactor to the active site.

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