7A20 image
Deposition Date 2020-08-14
Release Date 2020-11-04
Last Version Date 2024-05-15
Entry Detail
PDB ID:
7A20
Keywords:
Title:
Azobenzene-Based Inhibitors for Tryptophan Synthase
Biological Source:
Source Organism:
Host Organism:
Method Details:
Experimental Method:
Resolution:
2.50 Å
R-Value Free:
0.25
R-Value Work:
0.19
Space Group:
P 21 21 21
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Tryptophan synthase alpha chain,Tryptophan synthase beta chain
Chain IDs:A, B, C, D
Chain Length:709
Number of Molecules:4
Biological Source:Salmonella typhimurium
Primary Citation
Towards Photochromic Azobenzene-Based Inhibitors for Tryptophan Synthase.
Chemistry 27 2439 2451 (2021)
PMID: 33078454 DOI: 10.1002/chem.202004061

Abstact

Light regulation of drug molecules has gained growing interest in biochemical and pharmacological research in recent years. In addition, a serious need for novel molecular targets of antibiotics has emerged presently. Herein, the development of a photocontrollable, azobenzene-based antibiotic precursor towards tryptophan synthase (TS), an essential metabolic multienzyme complex in bacteria, is presented. The compound exhibited moderately strong inhibition of TS in its E configuration and five times lower inhibition strength in its Z configuration. A combination of biochemical, crystallographic, and computational analyses was used to characterize the inhibition mode of this compound. Remarkably, binding of the inhibitor to a hitherto-unconsidered cavity results in an unproductive conformation of TS leading to noncompetitive inhibition of tryptophan production. In conclusion, we created a promising lead compound for combatting bacterial diseases, which targets an essential metabolic enzyme, and whose inhibition strength can be controlled with light.

Legend

Protein

Chemical

Disease

Primary Citation of related structures