7A04 image
Deposition Date 2020-08-06
Release Date 2020-09-09
Last Version Date 2024-01-31
Entry Detail
PDB ID:
7A04
Keywords:
Title:
Structure of human CKa1 in complex with compound b
Biological Source:
Source Organism:
Homo sapiens (Taxon ID: 9606)
Host Organism:
Method Details:
Experimental Method:
Resolution:
2.15 Å
R-Value Free:
0.23
R-Value Work:
0.19
R-Value Observed:
0.19
Space Group:
P 21 21 21
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Choline kinase alpha
Gene (Uniprot):CHKA
Chain IDs:A, B
Chain Length:383
Number of Molecules:2
Biological Source:Homo sapiens
Primary Citation
Synthesis, biological evaluation, in silico modeling and crystallization of novel small monocationic molecules with potent antiproliferative activity by dual mechanism.
Eur.J.Med.Chem. 207 112797 112797 (2020)
PMID: 32977218 DOI: 10.1016/j.ejmech.2020.112797

Abstact

Seeking for new anticancer drugs with strong antiproliferative activity and simple molecular structure, we designed a novel series of compounds based on our previous reported pharmacophore model composed of five moieties. Antiproliferative assays on four tumoral cell lines and evaluation of Human Choline Kinase CKα1 enzymatic activity was performed for these compounds. Among tested molecules, those ones with biphenyl spacer showed betters enzymatic and antiproliferative activities (n-v). Docking and crystallization studies validate the hypothesis and confirm the results. The most active compound (t) induces a significant arrest of the cell cycle in G0/G1 phase that ultimately lead to apoptosis, following the mitochondrial pathway, as demonstrated for other choline kinase inhibitors. However additional assays reveal that the inhibition of choline uptake could also be involved in the antiproliferative outcome of this class of compounds.

Legend

Protein

Chemical

Disease

Primary Citation of related structures