6ybl image
Deposition Date 2020-03-17
Release Date 2020-11-18
Last Version Date 2024-01-24
Entry Detail
PDB ID:
6YBL
Keywords:
Title:
Structure of MBP-Mcl-1 in complex with compound 9m
Biological Source:
Source Organism:
Host Organism:
Method Details:
Experimental Method:
Resolution:
2.10 Å
R-Value Free:
0.22
R-Value Work:
0.17
R-Value Observed:
0.17
Space Group:
P 21 21 2
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Maltose/maltodextrin-binding periplasmic protein,Induced myeloid leukemia cell differentiation protein Mcl-1
Gene (Uniprot):MCL1
Mutations:K194A,K197A,R201A
Chain IDs:A
Chain Length:518
Number of Molecules:1
Biological Source:Escherichia coli O157:H7, Homo sapiens
Ligand Molecules
Peptide-like Molecules
PRD_900001
Primary Citation

Abstact

Myeloid cell leukemia 1 (Mcl-1) has emerged as an attractive target for cancer therapy. It is an antiapoptotic member of the Bcl-2 family of proteins, whose upregulation in human cancers is associated with high tumor grade, poor survival, and resistance to chemotherapy. Here we report the discovery of our clinical candidate S64315, a selective small molecule inhibitor of Mcl-1. Starting from a fragment derived lead compound, we have conducted structure guided optimization that has led to a significant (3 log) improvement of target affinity as well as cellular potency. The presence of hindered rotation along a biaryl axis has conferred high selectivity to the compounds against other members of the Bcl-2 family. During optimization, we have also established predictive PD markers of Mcl-1 inhibition and achieved both efficient in vitro cell killing and tumor regression in Mcl-1 dependent cancer models. The preclinical candidate has drug-like properties that have enabled its development and entry into clinical trials.

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Disease

Primary Citation of related structures