ISDA: 6BAE

Deposition Date 2017-10-12

Release Date 2018-09-05

Last Version Date 2024-11-13

Entry Detail

PDB ID:

6BAE

Keywords:

IMMUNE SYSTEM

Title:

Trastuzumab Fab v3 in complex with CQFDLSTRRLKC

Biological Source:

Source Organism(s):

Mus musculus (Taxon ID: 10090)
Homo sapiens (Taxon ID: 9606)
Finegoldia magna (Taxon ID: 1260)
Staphylococcus aureus (Taxon ID: 1280)
synthetic construct (Taxon ID: 32630)

Expression System(s):

Cricetulus griseus, Escherichia coli bl21(de3)

Method Details:

Experimental Method:

X-RAY DIFFRACTION

Resolution:

2.14 Å

R-Value Free:

0.22

R-Value Work:

0.17

R-Value Observed:

0.17

Space Group:

P 21 21 21

Download Validation Report

Macromolecular Entities

Structures with similar UniProt ID

Protein Blast

Polymer Type:polypeptide(L)
Molecule:Trastuzumab Fab light chain
Gene (Uniprot):IGKC
Chain IDs:A
Chain Length:214
Number of Molecules:1
Biological Source:Mus musculus, Homo sapiens

UniProt ID:P01834 Pfam ID:PF07654

Structures with similar UniProt ID

Protein Blast

Polymer Type:polypeptide(L)
Molecule:Trastuzumab Fab heavy chain
Mutagens:A175C, R217K
Chain IDs:B
Chain Length:223
Number of Molecules:1
Biological Source:Mus musculus, Homo sapiens

UniProt ID:S6B291 Pfam ID:PF07686, PF07654

Structures with similar UniProt ID

Protein Blast

Polymer Type:polypeptide(L)
Molecule:Immunoglobulin G binding protein A
Chain IDs:D (auth: C)
Chain Length:54
Number of Molecules:1
Biological Source:Staphylococcus aureus

UniProt ID:P02976 Pfam ID:PF02216

Polymer Type:polypeptide(L)
Molecule:meditope
Chain IDs:E (auth: D)
Chain Length:14
Number of Molecules:1
Biological Source:synthetic construct

Structures with similar UniProt ID

Protein Blast

Polymer Type:polypeptide(L)
Molecule:Protein L
Mutagens:T17I, D38A, Y56N, T57H, I58M
Chain IDs:C (auth: E)
Chain Length:64
Number of Molecules:1
Biological Source:Finegoldia magna

UniProt ID:Q51918 Pfam ID:PF02246

Primary Citation

Template-Catalyzed, Disulfide Conjugation of Monoclonal Antibodies Using a Natural Amino Acid Tag.

King, J.D, Ma, Y, Kuo, Y.C, Bzymek, K.P, Goodstein, L.H, Meyer, K, Moore, R.E, Crow, D, Colcher, D.M, Singh, G, Horne, D.A, Williams, J.C.Show

Bioconjug. Chem. 29 2074 2081 (2018)

PMID: 29763554 DOI: 10.1021/acs.bioconjchem.8b00284

Primary Citation of related structures

Feedback Form