6ZYL image
Deposition Date 2020-08-02
Release Date 2020-10-14
Last Version Date 2024-01-31
Entry Detail
PDB ID:
6ZYL
Title:
non-heme monooxygenase; ThoJ apo
Biological Source:
Source Organism:
Method Details:
Experimental Method:
Resolution:
2.09 Å
R-Value Free:
0.20
R-Value Work:
0.17
R-Value Observed:
0.17
Space Group:
P 41 21 2
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Uncharacterized protein
Gene (Uniprot):VT52_024865
Chain IDs:A
Chain Length:310
Number of Molecules:1
Biological Source:Streptomyces malaysiense
Ligand Molecules
Primary Citation
Non-Heme Monooxygenase ThoJ Catalyzes Thioholgamide beta-Hydroxylation.
Acs Chem.Biol. 15 2815 2819 (2020)
PMID: 32965102 DOI: 10.1021/acschembio.0c00637

Abstact

Thioviridamide-like compounds, including thioholgamides, are ribosomally synthesized and post-translationally modified peptide natural products with potent anticancer cell activity and an unprecedented structure. Very little is known about their biosynthesis, and we were intrigued by the β-hydroxy-N1, N3-dimethylhistidinium moiety found in these compounds. Here we report the construction of a heterologous host capable of producing thioholgamide with a 15-fold increased yield compared to the wild-type strain. A knockout of thoJ, encoding a predicted nonheme monooxygenase, shows that ThoJ is essential for thioholgamide β-hydroxylation. The crystal structure of ThoJ exhibits a typical mono/dioxygenase fold with conserved key active-site residues. Yet, ThoJ possesses a very large substrate binding pocket that appears suitable to receive a cyclic thioholgamide intermediate for hydroxylation. The improved production of the heterologous host will enable the dissection of the individual biosynthetic steps involved in biosynthesis of this exciting RiPP family.

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Primary Citation of related structures