6ZU4 image
Deposition Date 2020-07-21
Release Date 2020-11-18
Last Version Date 2024-01-31
Entry Detail
PDB ID:
6ZU4
Keywords:
Title:
Human Sirt6 13-308 in complex with ADP-ribose and the activator fluvastatin
Biological Source:
Source Organism:
Homo sapiens (Taxon ID: 9606)
Host Organism:
Method Details:
Experimental Method:
Resolution:
2.46 Å
R-Value Free:
0.20
R-Value Work:
0.15
R-Value Observed:
0.15
Space Group:
P 63
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:NAD-dependent protein deacetylase sirtuin-6
Gene (Uniprot):SIRT6
Chain IDs:A, B
Chain Length:302
Number of Molecules:2
Biological Source:Homo sapiens
Primary Citation
Structural Basis for Activation of Human Sirtuin 6 by Fluvastatin.
Acs Med.Chem.Lett. 11 2285 2289 (2020)
PMID: 33214841 DOI: 10.1021/acsmedchemlett.0c00407

Abstact

Sirtuins are NAD+-dependent protein lysine deacylases that are considered attractive drug targets for aging-related diseases. Sirt6 deacetylates, e.g., transcription factors and histone H3, and regulates metabolic processes and stress responses. It has been implicated in lifespan extension and tumor suppression. Sirt6 deacetylase activity can be stimulated with small molecules, and fluvastatin, an FDA-approved synthetic statin, was recently described as a novel Sirt6 activator. We studied the molecular details of this effect on Sirt6 in deacylation assays and by solving a crystal structure of a Sirt6/fluvastatin complex. We find that fluvastatin inhibits Sirt1-3 at higher concentrations but has a unique, activating effect on Sirt6. The complex structure reveals that fluvastatin occupies the Sirt6 substrate acyl channel exit, similar to other, unrelated activator families, providing interaction details that will support the development of potent, druglike Sirt6 activators.

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