ISDA: 6ZR3

Deposition Date 2020-07-10

Release Date 2021-07-21

Last Version Date 2024-11-13

Entry Detail

PDB ID:

6ZR3

Keywords:

SUGAR BINDING PROTEIN

Title:

Crystal structure of tetrameric fibrinogen-like recognition domain of FIBCD1 with N-acetyl-galactosamine-4-sulfate ligand bound

Biological Source:

Source Organism:

Homo sapiens (Taxon ID: 9606)

Host Organism:

Spodoptera frugiperda

Method Details:

Experimental Method:

X-RAY DIFFRACTION

Resolution:

1.97 Å

R-Value Free:

0.22

R-Value Work:

0.18

R-Value Observed:

0.18

Space Group:

P 4

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Macromolecular Entities

Structures with similar UniProt ID

Protein Blast

Polymer Type:polypeptide(L)
Molecule:Fibrinogen C domain-containing protein 1
Gene (Uniprot):FIBCD1
Chain IDs:A, B
Chain Length:226
Number of Molecules:2
Biological Source:Homo sapiens

UniProt ID:Q8N539 Pfam ID:PF00147

Ligand Molecules

ACY

ASG

GOL

SO4

Primary Citation

Crystal structures of human immune protein FIBCD1 suggest an extended binding site compatible with recognition of pathogen associated carbohydrate motifs

Williams, H.M, Moeller, J.B, Burns, I, Schlosser, A, Sorensen, G.L, Greenhough, T.J, Holmskov, U, Shrive, A.K, Shrive, A.K, Moeller, J.B, Burns, I, Paterson, J.M, Shaw, A.J, Schlosser, A, Sorensen, G.L, Greenhough, T.J, Holmskov, U.Show

J.Biol.Chem. ? ? ? (2023)

DOI: 10.1016/j.jbc.2023.105552

Primary Citation of related structures