6ZQK image
Deposition Date 2020-07-09
Release Date 2021-06-30
Last Version Date 2024-11-20
Entry Detail
PDB ID:
6ZQK
Title:
HER2-binding scFv-Fab fusion 841
Biological Source:
Source Organism:
Mus musculus (Taxon ID: 10090)
Host Organism:
Method Details:
Experimental Method:
Resolution:
2.20 Å
R-Value Free:
0.24
R-Value Work:
0.20
R-Value Observed:
0.20
Space Group:
P 1
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:841 heavy chain
Chain IDs:A, C
Chain Length:469
Number of Molecules:2
Biological Source:Mus musculus
Polymer Type:polypeptide(L)
Molecule:841 light chain
Chain IDs:B, D
Chain Length:223
Number of Molecules:2
Biological Source:Mus musculus
Ligand Molecules
Primary Citation
Engineering an anti-HER2 biparatopic antibody with a multimodal mechanism of action.
Nat Commun 12 3790 3790 (2021)
PMID: 34145240 DOI: 10.1038/s41467-021-23948-6

Abstact

The receptor tyrosine kinase HER2 acts as oncogenic driver in numerous cancers. Usually, the gene is amplified, resulting in receptor overexpression, massively increased signaling and unchecked proliferation. However, tumors become frequently addicted to oncogenes and hence are druggable by targeted interventions. Here, we design an anti-HER2 biparatopic and tetravalent IgG fusion with a multimodal mechanism of action. The molecule first induces HER2 clustering into inactive complexes, evidenced by reduced mobility of surface HER2. However, in contrast to our earlier binders based on DARPins, clusters of HER2 are thereafter robustly internalized and quantitatively degraded. This multimodal mechanism of action is found only in few of the tetravalent constructs investigated, which must target specific epitopes on HER2 in a defined geometric arrangement. The inhibitory effect of our antibody as single agent surpasses the combination of trastuzumab and pertuzumab as well as its parental mAbs in vitro and it is effective in a xenograft model.

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Primary Citation of related structures