6ZG3 image
Entry Detail
PDB ID:
6ZG3
Title:
the structure of ECF PanT transporter in a complex with a nanobody
Biological Source:
PDB Version:
Deposition Date:
2020-06-18
Release Date:
2021-03-03
Method Details:
Experimental Method:
Resolution:
2.80 Å
R-Value Free:
0.27
R-Value Work:
0.24
R-Value Observed:
0.24
Space Group:
P 1
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:Energy-coupling factor transporter ATP-binding protein EcfA1
Chain IDs:A, F
Chain Length:300
Number of Molecules:2
Biological Source:Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842 = JCM 1002
Polymer Type:polypeptide(L)
Description:Energy-coupling factor transporter ATP-binding protein EcfA2
Chain IDs:B, G
Chain Length:287
Number of Molecules:2
Biological Source:Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842 = JCM 1002
Polymer Type:polypeptide(L)
Description:Conserved hypothetical membrane protein
Chain IDs:C, H
Chain Length:215
Number of Molecules:2
Biological Source:Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842 = JCM 1002
Polymer Type:polypeptide(L)
Description:Putative cobalt ABC transporter, permease protein
Chain IDs:D, I
Chain Length:265
Number of Molecules:2
Biological Source:Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842 = JCM 1002
Polymer Type:polypeptide(L)
Description:CA14381 nanobody
Chain IDs:E, J
Chain Length:136
Number of Molecules:2
Biological Source:Lama glama
Primary Citation
In vitro reconstitution of dynamically interacting integral membrane subunits of energy-coupling factor transporters.
Elife 9 ? ? (2020)
PMID: 33350937 DOI: 10.7554/eLife.64389

Abstact

Energy-coupling factor (ECF) transporters mediate import of micronutrients in prokaryotes. They consist of an integral membrane S-component (that binds substrate) and ECF module (that powers transport by ATP hydrolysis). It has been proposed that different S-components compete for docking onto the same ECF module, but a minimal liposome-reconstituted system, required to substantiate this idea, is lacking. Here, we co-reconstituted ECF transporters for folate (ECF-FolT2) and pantothenate (ECF-PanT) into proteoliposomes, and assayed for crosstalk during active transport. The kinetics of transport showed that exchange of S-components is part of the transport mechanism. Competition experiments suggest much slower substrate association with FolT2 than with PanT. Comparison of a crystal structure of ECF-PanT with previously determined structures of ECF-FolT2 revealed larger conformational changes upon binding of folate than pantothenate, which could explain the kinetic differences. Our work shows that a minimal in vitro system with two reconstituted transporters recapitulates intricate kinetics behaviour observed in vivo.

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