6ZFF image
Deposition Date 2020-06-17
Release Date 2020-07-08
Last Version Date 2024-05-15
Entry Detail
PDB ID:
6ZFF
Keywords:
Title:
Pyrococcus furiosus Rad50 coiled coils in rod configuration
Biological Source:
Method Details:
Experimental Method:
Resolution:
3.00 Å
R-Value Free:
0.29
R-Value Work:
0.24
R-Value Observed:
0.25
Space Group:
I 41
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:DNA double-strand break repair Rad50 ATPase
Gene (Uniprot):rad50
Chain IDs:A, B
Chain Length:140
Number of Molecules:2
Biological Source:Pyrococcus furiosus (strain ATCC 43587 / DSM 3638 / JCM 8422 / Vc1)
Ligand Molecules
Primary Citation
A rod conformation of the Pyrococcus furiosus Rad50 coiled coil.
Proteins 89 251 255 (2021)
PMID: 32875643 DOI: 10.1002/prot.26005

Abstact

The Rad50-Mre11 nuclease complex plays a vital role in DNA repair in all domains of life. It recognizes and processes DNA double-strand breaks. Rad50 proteins fold into an extended structure with a 20 to 60 nm long coiled coil connecting a globular ABC ATPase domain with a zinc hook dimerization domain. A published structure of an archaeal Rad50 zinc hook shows coiled coils pointing away from each other. Here we present the crystal structure of an alternate conformation displaying co-aligned coiled coils. Archaeal Rad50 may thus switch between rod-shaped and ring-like conformations as recently proposed for a bacterial homolog.

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Protein

Chemical

Disease

Primary Citation of related structures
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