6ZEU image
Deposition Date 2020-06-16
Release Date 2020-10-14
Last Version Date 2024-11-06
Entry Detail
PDB ID:
6ZEU
Keywords:
Title:
Crystal structure of proteinase K lamella by electron diffraction with a 50 micrometre C2 condenser aperture
Biological Source:
Source Organism:
Method Details:
Experimental Method:
Resolution:
2.00 Å
R-Value Free:
0.23
R-Value Work:
0.19
Space Group:
P 43 21 2
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Proteinase K
Gene (Uniprot):PROK
Chain IDs:A (auth: AAA)
Chain Length:279
Number of Molecules:1
Biological Source:Parengyodontium album
Ligand Molecules
Primary Citation
A Workflow for Protein Structure Determination From Thin Crystal Lamella by Micro-Electron Diffraction.
Front Mol Biosci 7 179 179 (2020)
PMID: 32850967 DOI: 10.3389/fmolb.2020.00179

Abstact

MicroED has recently emerged as a powerful method for the analysis of biological structures at atomic resolution. This technique has been largely limited to protein nanocrystals which grow either as needles or plates measuring only a few hundred nanometers in thickness. Furthermore, traditional microED data processing uses established X-ray crystallography software that is not optimized for handling compound effects that are unique to electron diffraction data. Here, we present an integrated workflow for microED, from sample preparation by cryo-focused ion beam milling, through data collection with a standard Ceta-D detector, to data processing using the DIALS software suite, thus enabling routine atomic structure determination of protein crystals of any size and shape using microED. We demonstrate the effectiveness of the workflow by determining the structure of proteinase K to 2.0 Å resolution and show the advantage of using protein crystal lamellae over nanocrystals.

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Primary Citation of related structures