6ZCT image
Deposition Date 2020-06-12
Release Date 2020-06-24
Last Version Date 2024-01-24
Entry Detail
PDB ID:
6ZCT
Keywords:
Title:
Nonstructural protein 10 (nsp10) from SARS CoV-2
Biological Source:
Method Details:
Experimental Method:
Resolution:
2.55 Å
R-Value Free:
0.19
R-Value Work:
0.18
R-Value Observed:
0.19
Space Group:
I 21 3
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:nsp10
Mutations:The first 3 residues (TMG) are cloning artefacts.
Chain IDs:A
Chain Length:125
Number of Molecules:1
Biological Source:Severe acute respiratory syndrome coronavirus 2
Ligand Molecules
Primary Citation
Crystal Structure of Non-Structural Protein 10 from Severe Acute Respiratory Syndrome Coronavirus-2.
Int J Mol Sci 21 ? ? (2020)
PMID: 33036230 DOI: 10.3390/ijms21197375

Abstact

Severe Acute Respiratory Syndrome Coronavirus-2 (SARS-CoV-2), causing Coronavirus Disease 19 (COVID-19), emerged at the end of 2019 and quickly spread to cause a global pandemic with severe socio-economic consequences. The early sequencing of its RNA genome revealed its high similarity to SARS, likely to have originated from bats. The SARS-CoV-2 non-structural protein 10 (nsp10) displays high sequence similarity with its SARS homologue, which binds to and stimulates the 3'-to-5' exoribonuclease and the 2'-O-methlytransferase activities of nsps 14 and 16, respectively. Here, we report the biophysical characterization and 1.6 Å resolution structure of the unbound form of nsp10 from SARS-CoV-2 and compare it to the structures of its SARS homologue and the complex-bound form with nsp16 from SARS-CoV-2. The crystal structure and solution behaviour of nsp10 will not only form the basis for understanding the role of SARS-CoV-2 nsp10 as a central player of the viral RNA capping apparatus, but will also serve as a basis for the development of inhibitors of nsp10, interfering with crucial functions of the replication-transcription complex and virus replication.

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Primary Citation of related structures