6Z7N image
Entry Detail
PDB ID:
6Z7N
EMDB ID:
Keywords:
Title:
The atomic structure of HAdV-F41 at pH 7.4
Biological Source:
Source Organism:
PDB Version:
Deposition Date:
2020-05-31
Release Date:
2021-02-10
Method Details:
Experimental Method:
Resolution:
3.77 Å
Aggregation State:
PARTICLE
Reconstruction Method:
SINGLE PARTICLE
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:Pre-protein VI
Chain IDs:A (auth: 0), B (auth: 1), C (auth: 2), D (auth: 3), E (auth: 4), F (auth: 5), G (auth: 6), H (auth: 7), I (auth: 8), J (auth: 9)
Chain Length:266
Number of Molecules:10
Biological Source:Human adenovirus 41
Polymer Type:polypeptide(L)
Description:Hexon protein
Chain IDs:K (auth: A), L (auth: B), M (auth: C), N (auth: D), O (auth: E), P (auth: F), Q (auth: G), R (auth: H), S (auth: I), T (auth: J), U (auth: K), V (auth: L)
Chain Length:925
Number of Molecules:12
Biological Source:Human adenovirus 41
Polymer Type:polypeptide(L)
Description:Penton protein
Chain IDs:W (auth: M)
Chain Length:508
Number of Molecules:1
Biological Source:Human adenovirus 41
Polymer Type:polypeptide(L)
Description:Core-capsid bridging protein
Chain IDs:X (auth: N)
Chain Length:348
Number of Molecules:1
Biological Source:Human adenovirus 41
Polymer Type:polypeptide(L)
Description:Pre-hexon-linking protein IIIa
Chain IDs:Y (auth: O)
Chain Length:579
Number of Molecules:1
Biological Source:Human adenovirus 41
Polymer Type:polypeptide(L)
Description:Hexon-interlacing protein
Chain IDs:Z (auth: P), AA (auth: Q), BA (auth: R), CA (auth: S)
Chain Length:133
Number of Molecules:4
Biological Source:Human adenovirus 41
Polymer Type:polypeptide(L)
Description:Pre-hexon-linking protein VIII
Chain IDs:DA (auth: T), EA (auth: U)
Chain Length:233
Number of Molecules:2
Biological Source:Human adenovirus 41
Polymer Type:polypeptide(L)
Description:Unknown
Chain IDs:GA (auth: W), HA (auth: V), JA (auth: Z)
Chain Length:10
Number of Molecules:3
Biological Source:Human adenovirus 41
Polymer Type:polypeptide(L)
Description:Fiber protein
Chain IDs:FA (auth: X)
Chain Length:7
Number of Molecules:1
Biological Source:Human adenovirus 41
Polymer Type:polypeptide(L)
Description:Unknown
Chain IDs:IA (auth: Y)
Chain Length:6
Number of Molecules:1
Biological Source:Human adenovirus 41
Ligand Molecules
Primary Citation
The structure of enteric human adenovirus 41-A leading cause of diarrhea in children.
Sci Adv 7 ? ? (2021)
PMID: 33523995 DOI: 10.1126/sciadv.abe0974

Abstact

Human adenovirus (HAdV) types F40 and F41 are a prominent cause of diarrhea and diarrhea-associated mortality in young children worldwide. These enteric HAdVs differ notably in tissue tropism and pathogenicity from respiratory and ocular adenoviruses, but the structural basis for this divergence has been unknown. Here, we present the first structure of an enteric HAdV-HAdV-F41-determined by cryo-electron microscopy to a resolution of 3.8 Å. The structure reveals extensive alterations to the virion exterior as compared to nonenteric HAdVs, including a unique arrangement of capsid protein IX. The structure also provides new insights into conserved aspects of HAdV architecture such as a proposed location of core protein V, which links the viral DNA to the capsid, and assembly-induced conformational changes in the penton base protein. Our findings provide the structural basis for adaptation of enteric HAdVs to a fundamentally different tissue tropism.

Legend

Protein

Chemical

Disease

Primary Citation of related structures