6Z11 image
Deposition Date 2020-05-11
Release Date 2020-11-04
Last Version Date 2024-05-22
Entry Detail
PDB ID:
6Z11
Keywords:
TRANSCRIPTION
Title:
Structure of Mycobacterium smegmatis HelD protein in complex with RNA polymerase core - State III, primary channel dis-engaged and active site interfering
Biological Source:
Source Organism:
Mycolicibacterium smegmatis MC2 155 (Taxon ID: 246196)
Host Organism:
Escherichia coli
Method Details:
Experimental Method:
ELECTRON MICROSCOPY
Resolution:
3.36 Å
Aggregation State:
PARTICLE
Reconstruction Method:
SINGLE PARTICLE
6Z11 validation report
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:DNA-directed RNA polymerase subunit alpha
Gene (Uniprot):rpoA
Chain IDs:A, B
Chain Length:350
Number of Molecules:2
Biological Source:Mycolicibacterium smegmatis MC2 155
UniProt ID:A0QSL8 Pfam ID:PF01193, PF01000, PF03118 EC:2.7.7.6
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:DNA-directed RNA polymerase subunit beta
Gene (Uniprot):rpoB
Chain IDs:C
Chain Length:1169
Number of Molecules:1
Biological Source:Mycolicibacterium smegmatis MC2 155
UniProt ID:P60281 Pfam ID:PF04563, PF04561, PF04565, PF10385, PF00562, PF04560 EC:2.7.7.6
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:DNA-directed RNA polymerase subunit beta'
Gene (Uniprot):rpoC
Chain IDs:D
Chain Length:1317
Number of Molecules:1
Biological Source:Mycolicibacterium smegmatis MC2 155
UniProt ID:A0QS66 Pfam ID:PF04997, PF00623, PF04983, PF05000, PF04998 EC:2.7.7.6
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:DNA-directed RNA polymerase subunit omega
Gene (Uniprot):rpoZ
Chain IDs:E
Chain Length:107
Number of Molecules:1
Biological Source:Mycolicibacterium smegmatis MC2 155
UniProt ID:A0QWT1 Pfam ID:PF01192 EC:2.7.7.6
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:RNA polymerase-associated transcription factor HelD
Gene (Uniprot):MSMEG_2174
Chain IDs:F (auth: H)
Chain Length:736
Number of Molecules:1
Biological Source:Mycolicibacterium smegmatis MC2 155
UniProt ID:A0QUE0 Pfam ID:PF00580
Ligand Molecules
MG
ZN
Primary Citation
HelD, a helicase-like protein from gram-positive bacteria in complex with RNA polymerase
To Be Published ? ? ? (?)
Primary Citation of related structures
6YXU