6Z0I image
Deposition Date 2020-05-08
Release Date 2020-09-16
Last Version Date 2024-06-19
Entry Detail
PDB ID:
6Z0I
Title:
Structure of the TREM2 transmembrane helix in complex with DAP12 in DPC micelles
Biological Source:
Source Organism:
Homo sapiens (Taxon ID: 9606)
Host Organism:
Method Details:
Experimental Method:
Conformers Calculated:
100
Conformers Submitted:
20
Selection Criteria:
structures with the lowest energy
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Triggering receptor expressed on myeloid cells 2
Gene (Uniprot):TREM2
Chain IDs:A
Chain Length:49
Number of Molecules:1
Biological Source:Homo sapiens
Ligand Molecules
Primary Citation
gamma-Secretase cleavage of the Alzheimer risk factor TREM2 is determined by its intrinsic structural dynamics.
Embo J. ? e104247 e104247 (2020)
PMID: 32830336 DOI: 10.15252/embj.2019104247

Abstact

Sequence variants of the microglial expressed TREM2 (triggering receptor expressed on myeloid cells 2) are a major risk factor for late onset Alzheimer's disease. TREM2 requires a stable interaction with DAP12 in the membrane to initiate signaling, which is terminated by TREM2 ectodomain shedding and subsequent intramembrane cleavage by γ-secretase. To understand the structural basis for the specificity of the intramembrane cleavage event, we determined the solution structure of the TREM2 transmembrane helix (TMH). Caused by the presence of a charged amino acid in the membrane region, the TREM2-TMH adopts a kinked structure with increased flexibility. Charge removal leads to TMH stabilization and reduced dynamics, similar to its structure in complex with DAP12. Strikingly, these dynamical features match with the site of the initial γ-secretase cleavage event. These data suggest an unprecedented cleavage mechanism by γ-secretase where flexible TMH regions act as key determinants of substrate cleavage specificity.

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Primary Citation of related structures