6YYX image
Deposition Date 2020-05-06
Release Date 2021-03-17
Last Version Date 2024-11-06
Entry Detail
PDB ID:
6YYX
Keywords:
OXIDOREDUCTASE
Title:
Aspartyl/Asparaginyl beta-hydroxylase (AspH) oxygenase and TPR domains in complex with manganese, 3-methyl-2-oxoglutarate, and factor X substrate peptide fragment(39mer-4Ser)
Biological Source:
Source Organism:
Homo sapiens (Taxon ID: 9606)
Host Organism:
Escherichia coli BL21(DE3)
Method Details:
Experimental Method:
X-RAY DIFFRACTION
Resolution:
1.53 Å
R-Value Free:
0.19
R-Value Work:
0.16
R-Value Observed:
0.16
Space Group:
P 21 21 21
6YYX validation report
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Aspartyl/asparaginyl beta-hydroxylase
Gene (Uniprot):ASPH
Chain IDs:A
Chain Length:429
Number of Molecules:1
Biological Source:Homo sapiens
UniProt ID:Q12797 Pfam ID:PF13432, PF05118 EC:1.14.11.16
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Coagulation factor X
Gene (Uniprot):F10
Chain IDs:B
Chain Length:39
Number of Molecules:1
Biological Source:Homo sapiens
UniProt ID:P00742 Pfam ID:PF00008 EC:3.4.21.6
Ligand Molecules
MN
Q1Z
Primary Citation
Synthesis of 2-oxoglutarate derivatives and their evaluation as cosubstrates and inhibitors of human aspartate/asparagine-beta-hydroxylase
Chem Sci 12 1327 1342 (2021)
DOI: 10.1039/D0SC04301J
Primary Citation of related structures
6YYX