6YYJ image
Deposition Date 2020-05-05
Release Date 2021-01-20
Last Version Date 2024-01-24
Entry Detail
PDB ID:
6YYJ
Keywords:
Title:
Crystal structure of native Phycocyanin from T. elongatus in spacegroup P21212 at 2.1 Angstroms
Biological Source:
Source Organism:
Method Details:
Experimental Method:
Resolution:
2.16 Å
R-Value Free:
0.25
R-Value Work:
0.20
R-Value Observed:
0.20
Space Group:
P 21 21 2
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:C-phycocyanin alpha chain
Gene (Uniprot):cpcA
Chain IDs:A, C, E
Chain Length:162
Number of Molecules:3
Biological Source:Thermosynechococcus elongatus
Polymer Type:polypeptide(L)
Molecule:C-phycocyanin beta chain
Gene (Uniprot):cpcB
Chain IDs:B, D, F
Chain Length:172
Number of Molecules:3
Biological Source:Thermosynechococcus elongatus
Modified Residue
Compound ID Chain ID Parent Comp ID Details 2D Image
MEN B ASN modified residue
Primary Citation
C-phycocyanin as a highly attractive model system in protein crystallography: unique crystallization properties and packing-diversity screening.
Acta Crystallogr D Struct Biol 77 224 236 (2021)
PMID: 33559611 DOI: 10.1107/S2059798320016071

Abstact

The unique crystallization properties of the antenna protein C-phycocyanin (C-PC) from the thermophilic cyanobacterium Thermosynechococcus elongatus are reported and discussed. C-PC crystallizes in hundreds of significantly different conditions within a broad pH range and in the presence of a wide variety of precipitants and additives. Remarkably, the crystal dimensions vary from a few micrometres, as used in serial crystallography, to several hundred micrometres, with a very diverse crystal morphology. More than 100 unique single-crystal X-ray diffraction data sets were collected from randomly selected crystals and analysed. The addition of small-molecule additives revealed three new crystal packings of C-PC, which are discussed in detail. The high propensity of this protein to crystallize, combined with its natural blue colour and its fluorescence characteristics, make it an excellent candidate as a superior and highly adaptable model system in crystallography. C-PC can be used in technical and methods development approaches for X-ray and neutron diffraction techniques, and as a system for comprehending the fundamental principles of protein crystallography.

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