6YW8 image
Deposition Date 2020-04-29
Release Date 2021-05-12
Last Version Date 2024-11-13
Entry Detail
PDB ID:
6YW8
Keywords:
Title:
NMR solution structure of unbound recombinant human Nerve Growth Factor (rhNGF)
Biological Source:
Source Organism:
Homo sapiens (Taxon ID: 9606)
Host Organism:
Method Details:
Experimental Method:
Conformers Calculated:
200
Conformers Submitted:
20
Selection Criteria:
structures with the lowest energy
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Beta-nerve growth factor
Gene (Uniprot):NGF
Chain IDs:A, B
Chain Length:118
Number of Molecules:2
Biological Source:Homo sapiens
Ligand Molecules
Primary Citation
Endogenous modulators of neurotrophin signaling: Landscape of the transient ATP-NGF interactions.
Comput Struct Biotechnol J 19 2938 2949 (2021)
PMID: 34136093 DOI: 10.1016/j.csbj.2021.05.009

Abstact

The Nerve Growth Factor (NGF) neurotrophin acts in the maintenance and growth of neuronal populations. Despite the detailed knowledge of NGF's role in neuron physiology, the structural and mechanistic determinants of NGF bioactivity modulated by essential endogenous ligands are still lacking. We present the results of an integrated structural and advanced computational approach to characterize the extracellular ATP-NGF interaction. We mapped by NMR the interacting surface and ATP orientation on NGF and revealed the functional role of this interaction in the binding to TrkA and p75NTR receptors by SPR. The role of divalent ions was explored in conjunction with ATP. Our results pinpoint ATP as a likely transient molecular modulator of NGF signaling, in health and disease states.

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Primary Citation of related structures