6YTL image
Deposition Date 2020-04-24
Release Date 2020-05-13
Last Version Date 2025-07-02
Entry Detail
PDB ID:
6YTL
Title:
Cryo-EM structure of a dimer of undecameric human CALHM4 in the absence of Ca2+
Biological Source:
Source Organism:
Homo sapiens (Taxon ID: 9606)
Host Organism:
Method Details:
Experimental Method:
Resolution:
3.82 Å
Aggregation State:
PARTICLE
Reconstruction Method:
SINGLE PARTICLE
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Calcium homeostasis modulator protein 4
Gene (Uniprot):CALHM4
Chain IDs:A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V
Chain Length:314
Number of Molecules:22
Biological Source:Homo sapiens
Ligand Molecules
Primary Citation
Cryo-EM structures and functional properties of CALHM channels of the human placenta.
Elife 9 ? ? (2020)
PMID: 32374262 DOI: 10.7554/eLife.55853

Abstact

The transport of substances across the placenta is essential for the development of the fetus. Here, we were interested in the role of channels of the calcium homeostasis modulator (CALHM) family in the human placenta. By transcript analysis, we found the paralogs CALHM2, 4, and 6 to be highly expressed in this organ and upregulated during trophoblast differentiation. Based on electrophysiology, we observed that activation of these paralogs differs from the voltage- and calcium-gated channel CALHM1. Cryo-EM structures of CALHM4 display decameric and undecameric assemblies with large cylindrical pore, while in CALHM6 a conformational change has converted the pore shape into a conus that narrows at the intracellular side, thus describing distinct functional states of the channel. The pore geometry alters the distribution of lipids, which occupy the cylindrical pore of CALHM4 in a bilayer-like arrangement whereas they have redistributed in the conical pore of CALHM6 with potential functional consequences.

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Primary Citation of related structures