ISDA

Deposition Date 2020-04-18

Release Date 2020-05-20

Last Version Date 2024-05-01

Entry Detail

PDB ID:

6YQQ

Keywords:

BIOSYNTHETIC PROTEIN

Title:

ForT-PRPP complex

Biological Source:

Source Organism:

Streptomyces kaniharaensis (Taxon ID: 212423)

Host Organism:

Escherichia coli

Method Details:

Experimental Method:

X-RAY DIFFRACTION

Resolution:

2.50 Å

R-Value Free:

0.26

R-Value Work:

0.22

R-Value Observed:

0.22

Space Group:

P 41 21 2

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Macromolecular Entities

Protein Blast

Polymer Type:polypeptide(L)
Molecule:ForT-PRPP complex
Gene (Uniprot):cof6
Chain IDs:A
Chain Length:341
Number of Molecules:1
Biological Source:Streptomyces kaniharaensis

UniProt ID:A0A5S9CYM0 Pfam ID:PF08544

Ligand Molecules

PRP

Primary Citation

Uncovering the chemistry of C-C bond formation in C-nucleoside biosynthesis: crystal structure of a C-glycoside synthase/PRPP complex.

Gao, S, Radadiya, A, Li, W, Liu, H, Zhu, W, de Crecy-Lagard, V, Richards, N.G.J, Naismith, J.H.Show

Chem.Commun.(Camb.) 56 7617 7620 (2020)

PMID: 32515440 DOI: 10.1039/d0cc02834g

Abstact

The enzyme ForT catalyzes C-C bond formation between 5'-phosphoribosyl-1'-pyrophosphate (PRPP) and 4-amino-1H-pyrazole-3,5-dicarboxylate to make a key intermediate in the biosynthesis of formycin A 5'-phosphate by Streptomyces kaniharaensis. We report the 2.5 Å resolution structure of the ForT/PRPP complex and locate active site residues critical for PRPP recognition and catalysis.

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Protein

Chemical

Disease

Primary Citation of related structures