6YOH image
Deposition Date 2020-04-14
Release Date 2021-02-24
Last Version Date 2024-01-24
Entry Detail
PDB ID:
6YOH
Title:
LecA from Pseudomonas aeruginosa in complex with a catechol CAS no. 61445-50-9
Biological Source:
Source Organism:
Method Details:
Experimental Method:
Resolution:
1.84 Å
R-Value Free:
0.22
R-Value Work:
0.19
R-Value Observed:
0.19
Space Group:
P 21 2 21
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:PA-I galactophilic lectin
Gene (Uniprot):lecA
Chain IDs:A, B, C, D
Chain Length:121
Number of Molecules:4
Biological Source:Pseudomonas aeruginosa PAO1
Primary Citation
Non-Carbohydrate Glycomimetics as Inhibitors of Calcium(II)-binding Lectins.
Angew.Chem.Int.Ed.Engl. ? ? ? (2020)
PMID: 33314528 DOI: 10.1002/anie.202013217

Abstact

Because of the antimicrobial resistance crisis, lectins are considered novel drug targets. Pseudomonas aeruginosa utilizes LecA and LecB in the infection process. Inhibition of both lectins with carbohydrate-derived molecules can reduce biofilm formation to restore antimicrobial susceptibility. Here, we focused on non-carbohydrate inhibitors for LecA to explore new avenues for lectin inhibition. From a screening cascade we obtained one experimentally confirmed hit, a catechol, belonging to the well-known PAINS compounds. Rigorous analyses validated electron-deficient catechols as millimolar LecA inhibitors. The first co-crystal structure of a non-carbohydrate inhibitor in complex with a bacterial lectin clearly demonstrates the catechol mimicking the binding of natural glycosides with LecA. Importantly, catechol 3 is the first non-carbohydrate lectin ligand that binds bacterial and mammalian calcium(II)-binding lectins, giving rise to this fundamentally new class of glycomimetics.

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Primary Citation of related structures