6YGF image
Deposition Date 2020-03-27
Release Date 2020-12-23
Last Version Date 2024-11-13
Entry Detail
PDB ID:
6YGF
Keywords:
Title:
NADase from Aspergillus fumigatus with trapped reaction products
Biological Source:
Source Organism:
Host Organism:
Method Details:
Experimental Method:
Resolution:
1.70 Å
R-Value Free:
0.20
R-Value Work:
0.16
R-Value Observed:
0.17
Space Group:
P 32 2 1
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:AfNADase
Gene (Uniprot):nadA
Chain IDs:A (auth: B), B (auth: A)
Chain Length:248
Number of Molecules:2
Biological Source:Aspergillus fumigatus Af293
Primary Citation
Discovery of fungal surface NADases predominantly present in pathogenic species.
Nat Commun 12 1631 1631 (2021)
PMID: 33712585 DOI: 10.1038/s41467-021-21307-z

Abstact

Nicotinamide adenine dinucleotide (NAD) is a key molecule in cellular bioenergetics and signalling. Various bacterial pathogens release NADase enzymes into the host cell that deplete the host's NAD+ pool, thereby causing rapid cell death. Here, we report the identification of NADases on the surface of fungi such as the pathogen Aspergillus fumigatus and the saprophyte Neurospora crassa. The enzymes harbour a tuberculosis necrotizing toxin (TNT) domain and are predominately present in pathogenic species. The 1.6 Å X-ray structure of the homodimeric A. fumigatus protein reveals unique properties including N-linked glycosylation and a Ca2+-binding site whose occupancy regulates activity. The structure in complex with a substrate analogue suggests a catalytic mechanism that is distinct from those of known NADases, ADP-ribosyl cyclases and transferases. We propose that fungal NADases may convey advantages during interaction with the host or competing microorganisms.

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Primary Citation of related structures