6YBS image
Entry Detail
PDB ID:
6YBS
EMDB ID:
Keywords:
Title:
Structure of a human 48S translational initiation complex - head
Biological Source:
Source Organism:
PDB Version:
Deposition Date:
2020-03-17
Release Date:
2020-09-16
Method Details:
Experimental Method:
Resolution:
3.10 Å
Aggregation State:
PARTICLE
Reconstruction Method:
SINGLE PARTICLE
Macromolecular Entities
Polymer Type:polyribonucleotide
Description:18S rRNA
Chain IDs:R (auth: A)
Chain Length:1869
Number of Molecules:1
Biological Source:Homo sapiens
Polymer Type:polypeptide(L)
Description:40S ribosomal protein S5
Chain IDs:O (auth: V)
Chain Length:204
Number of Molecules:1
Biological Source:Homo sapiens
Polymer Type:polypeptide(L)
Description:40S ribosomal protein S17
Chain IDs:D (auth: X)
Chain Length:135
Number of Molecules:1
Biological Source:Homo sapiens
Polymer Type:polypeptide(L)
Description:40S ribosomal protein S16
Chain IDs:Q (auth: Y)
Chain Length:146
Number of Molecules:1
Biological Source:Homo sapiens
Polymer Type:polypeptide(L)
Description:40S ribosomal protein S3
Chain IDs:K (auth: Z)
Chain Length:243
Number of Molecules:1
Biological Source:Homo sapiens
Polymer Type:polypeptide(L)
Description:40S ribosomal protein S10
Chain IDs:G (auth: a)
Chain Length:1869
Number of Molecules:1
Biological Source:Homo sapiens
Polymer Type:polypeptide(L)
Description:40S ribosomal protein S15
Chain IDs:J (auth: b)
Chain Length:145
Number of Molecules:1
Biological Source:Homo sapiens
Polymer Type:polypeptide(L)
Description:Receptor of activated protein C kinase 1
Chain IDs:B (auth: c)
Chain Length:317
Number of Molecules:1
Biological Source:Homo sapiens
Polymer Type:polypeptide(L)
Description:40S ribosomal protein S19
Chain IDs:L (auth: d)
Chain Length:145
Number of Molecules:1
Biological Source:Homo sapiens
Polymer Type:polypeptide(L)
Description:40S ribosomal protein S25
Chain IDs:M (auth: e)
Chain Length:125
Number of Molecules:1
Biological Source:Homo sapiens
Polymer Type:polypeptide(L)
Description:40S ribosomal protein S18
Chain IDs:N (auth: f)
Chain Length:152
Number of Molecules:1
Biological Source:Homo sapiens
Polymer Type:polypeptide(L)
Description:40S ribosomal protein S20
Chain IDs:E (auth: h)
Chain Length:119
Number of Molecules:1
Biological Source:Homo sapiens
Polymer Type:polypeptide(L)
Description:40S ribosomal protein S29
Chain IDs:I (auth: i)
Chain Length:56
Number of Molecules:1
Biological Source:Homo sapiens
Polymer Type:polypeptide(L)
Description:Ubiquitin-40S ribosomal protein S27a
Chain IDs:P (auth: k)
Chain Length:156
Number of Molecules:1
Biological Source:Homo sapiens
Polymer Type:polypeptide(L)
Description:40S ribosomal protein S12
Chain IDs:H (auth: m)
Chain Length:132
Number of Molecules:1
Biological Source:Homo sapiens
Polymer Type:polypeptide(L)
Description:40S ribosomal protein S28
Chain IDs:C (auth: n)
Chain Length:69
Number of Molecules:1
Biological Source:Homo sapiens
Polymer Type:polypeptide(L)
Description:Eukaryotic translation initiation factor 3 subunit G
Chain IDs:F (auth: o)
Chain Length:320
Number of Molecules:1
Biological Source:Homo sapiens
Polymer Type:polypeptide(L)
Description:Eukaryotic translation initiation factor 3 subunit D
Chain IDs:A (auth: x)
Chain Length:135
Number of Molecules:1
Biological Source:Homo sapiens
Primary Citation
Structure of a human 48Stranslational initiation complex.
Science 369 1220 1227 (2020)
PMID: 32883864 DOI: 10.1126/science.aba4904

Abstact

A key step in translational initiation is the recruitment of the 43S preinitiation complex by the cap-binding complex [eukaryotic initiation factor 4F (eIF4F)] at the 5' end of messenger RNA (mRNA) to form the 48S initiation complex (i.e., the 48S). The 48S then scans along the mRNA to locate a start codon. To understand the mechanisms involved, we used cryo-electron microscopy to determine the structure of a reconstituted human 48S The structure reveals insights into early events of translation initiation complex assembly, as well as how eIF4F interacts with subunits of eIF3 near the mRNA exit channel in the 43S The location of eIF4F is consistent with a slotting model of mRNA recruitment and suggests that downstream mRNA is unwound at least in part by being "pulled" through the 40S subunit during scanning.

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