ISDA

Deposition Date 2020-03-17

Release Date 2020-10-28

Last Version Date 2025-04-09

Entry Detail

PDB ID:

6YBQ

Keywords:

LIGASE

Title:

Engineered glycolyl-CoA carboxylase (quintuple mutant) with bound CoA

Biological Source:

Source Organism:

Methylorubrum extorquens (strain ATCC 14718 / DSM 1338 / JCM 2805 / NCIMB 9133 / AM1) (Taxon ID: 272630)

Host Organism:

Escherichia coli BL21(DE3)

Method Details:

Experimental Method:

ELECTRON MICROSCOPY

Resolution:

1.96 Å

Aggregation State:

PARTICLE

Reconstruction Method:

SINGLE PARTICLE

Download Validation Report

Macromolecular Entities

Protein Blast

Polymer Type:polypeptide(L)
Molecule:Propionyl-CoA carboxylase beta chain
Gene (Uniprot):pccB
Mutations:L100S, Y143H, D407I, I450V, W502R
Chain IDs:A, B, C, D, E, F
Chain Length:510
Number of Molecules:6
Biological Source:Methylorubrum extorquens (strain ATCC 14718 / DSM 1338 / JCM 2805 / NCIMB 9133 / AM1)

UniProt ID:C5AP75 Pfam ID:PF01039

Protein Blast

Polymer Type:polypeptide(L)
Molecule:Propionyl-CoA carboxylase alpha subunit
Gene (Uniprot):pccA
Chain IDs:G, H, I, J, K, L
Chain Length:667
Number of Molecules:6
Biological Source:Methylorubrum extorquens (strain ATCC 14718 / DSM 1338 / JCM 2805 / NCIMB 9133 / AM1)

UniProt ID:C5AWU5 Pfam ID:PF00289, PF02786, PF02785, PF18140, PF00364

Ligand Molecules