6YBA image
Entry Detail
PDB ID:
6YBA
EMDB ID:
Keywords:
Title:
HAdV-F41 Capsid
Biological Source:
PDB Version:
Deposition Date:
2020-03-16
Release Date:
2021-03-10
Method Details:
Experimental Method:
Resolution:
4.00 Å
Aggregation State:
PARTICLE
Reconstruction Method:
SINGLE PARTICLE
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:Hexon protein
Chain IDs:A, B, C, D, E, F, G, H, I, J, K, L
Chain Length:925
Number of Molecules:12
Biological Source:Human adenovirus F serotype 41
Polymer Type:polypeptide(L)
Description:Penton protein
Chain IDs:M
Chain Length:508
Number of Molecules:1
Biological Source:Human adenovirus F serotype 41
Polymer Type:polypeptide(L)
Description:Pre-hexon-linking protein IIIa
Chain IDs:N
Chain Length:579
Number of Molecules:1
Biological Source:Human adenovirus F serotype 41
Polymer Type:polypeptide(L)
Description:Pre-hexon-linking protein VIII
Chain IDs:O, P
Chain Length:233
Number of Molecules:2
Biological Source:Human adenovirus F serotype 41
Polymer Type:polypeptide(L)
Description:Hexon-interlacing protein
Chain IDs:Q, R, S, T
Chain Length:133
Number of Molecules:4
Biological Source:Human adenovirus F serotype 41
Polymer Type:polypeptide(L)
Description:Pre-protein VI
Chain IDs:U, V, X (auth: Y), Y (auth: u)
Chain Length:266
Number of Molecules:4
Biological Source:Human adenovirus F serotype 41
Polymer Type:polypeptide(L)
Description:Pre-histone-like nucleoprotein
Chain IDs:W, Z (auth: w)
Chain Length:183
Number of Molecules:2
Biological Source:Human adenovirus F serotype 41
Ligand Molecules
Primary Citation
Cryo-EM structure of enteric adenovirus HAdV-F41 highlights structural variations among human adenoviruses.
Sci Adv 7 ? ? (2021)
PMID: 33627423 DOI: 10.1126/sciadv.abd9421

Abstact

Enteric adenoviruses, one of the main causes of viral gastroenteritis in the world, must withstand the harsh conditions found in the gut. This requirement suggests that capsid stability must be different from that of other adenoviruses. We report the 4-Å-resolution structure of a human enteric adenovirus, HAdV-F41, and compare it with that of other adenoviruses with respiratory (HAdV-C5) and ocular (HAdV-D26) tropisms. While the overall structures of hexon, penton base, and internal minor coat proteins IIIa and VIII are conserved, we observe partially ordered elements reinforcing the vertex region, which suggests their role in enhancing the physicochemical capsid stability of HAdV-F41. Unexpectedly, we find an organization of the external minor coat protein IX different from all previously characterized human and nonhuman mastadenoviruses. Knowledge of the structure of enteric adenoviruses provides a starting point for the design of vectors suitable for oral delivery or intestinal targeting.

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Primary Citation of related structures