6YAE image
Deposition Date 2020-03-12
Release Date 2020-07-29
Last Version Date 2025-07-09
Entry Detail
PDB ID:
6YAE
Keywords:
Title:
AP2 core in physiological buffer
Biological Source:
Source Organism:
Rattus norvegicus (Taxon ID: 10116)
Homo sapiens (Taxon ID: 9606)
Mus musculus (Taxon ID: 10090)
Host Organism:
Method Details:
Experimental Method:
Resolution:
3.90 Å
Aggregation State:
PARTICLE
Reconstruction Method:
SINGLE PARTICLE
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:AP-2 complex subunit alpha
Chain IDs:A
Chain Length:621
Number of Molecules:1
Biological Source:Rattus norvegicus
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:AP-2 complex subunit beta
Gene (Uniprot):AP2B1
Chain IDs:B
Chain Length:591
Number of Molecules:1
Biological Source:Homo sapiens
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:AP-2 complex subunit mu
Gene (Uniprot):Ap2m1
Chain IDs:C (auth: M)
Chain Length:435
Number of Molecules:1
Biological Source:Rattus norvegicus
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:AP-2 complex subunit sigma
Gene (Uniprot):Ap2s1
Chain IDs:D (auth: S)
Chain Length:142
Number of Molecules:1
Biological Source:Mus musculus
Ligand Molecules
Primary Citation
Architecture of the AP2/clathrin coat on the membranes of clathrin-coated vesicles.
Sci Adv 6 eaba8381 eaba8381 (2020)
PMID: 32743075 DOI: 10.1126/sciadv.aba8381

Abstact

Clathrin-mediated endocytosis (CME) is crucial for modulating the protein composition of a cell's plasma membrane. Clathrin forms a cage-like, polyhedral outer scaffold around a vesicle, to which cargo-selecting clathrin adaptors are attached. Adaptor protein complex (AP2) is the key adaptor in CME. Crystallography has shown AP2 to adopt a range of conformations. Here, we used cryo-electron microscopy, tomography, and subtomogram averaging to determine structures, interactions, and arrangements of clathrin and AP2 at the key steps of coat assembly, from AP2 in solution to membrane-assembled clathrin-coated vesicles (CCVs). AP2 binds cargo and PtdIns(4,5)P 2 (phosphatidylinositol 4,5-bisphosphate)-containing membranes via multiple interfaces, undergoing conformational rearrangement from its cytosolic state. The binding mode of AP2 β2 appendage into the clathrin lattice in CCVs and buds implies how the adaptor structurally modulates coat curvature and coat disassembly.

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Protein

Chemical

Disease

Primary Citation of related structures
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