6Y7Q image
Deposition Date 2020-03-02
Release Date 2020-08-12
Last Version Date 2024-10-23
Entry Detail
PDB ID:
6Y7Q
Title:
Crystal Structure of the N-terminal PAS domain from the hERG3 Potassium Channel
Biological Source:
Source Organism:
Homo sapiens (Taxon ID: 9606)
Method Details:
Experimental Method:
Resolution:
1.39 Å
R-Value Free:
0.23
R-Value Work:
0.18
Space Group:
P 43 21 2
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Potassium voltage-gated channel subfamily H member 7
Gene (Uniprot):KCNH7
Chain IDs:A (auth: AAA)
Chain Length:135
Number of Molecules:1
Biological Source:Homo sapiens
Primary Citation
Discovery of a heme-binding domain in a neuronal voltage-gated potassium channel.
J.Biol.Chem. 295 13277 13286 (2020)
PMID: 32723862 DOI: 10.1074/jbc.RA120.014150

Abstact

The EAG (ether-à-go-go) family of voltage-gated K+ channels are important regulators of neuronal and cardiac action potential firing (excitability) and have major roles in human diseases such as epilepsy, schizophrenia, cancer, and sudden cardiac death. A defining feature of EAG (Kv10-12) channels is a highly conserved domain on the N terminus, known as the eag domain, consisting of a Per-ARNT-Sim (PAS) domain capped by a short sequence containing an amphipathic helix (Cap domain). The PAS and Cap domains are both vital for the normal function of EAG channels. Using heme-affinity pulldown assays and proteomics of lysates from primary cortical neurons, we identified that an EAG channel, hERG3 (Kv11.3), binds to heme. In whole-cell electrophysiology experiments, we identified that heme inhibits hERG3 channel activity. In addition, we expressed the Cap and PAS domain of hERG3 in Escherichia coli and, using spectroscopy and kinetics, identified the PAS domain as the location for heme binding. The results identify heme as a regulator of hERG3 channel activity. These observations are discussed in the context of the emerging role for heme as a regulator of ion channel activity in cells.

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