6Y5A image
Entry Detail
PDB ID:
6Y5A
EMDB ID:
Title:
Serotonin-bound 5-HT3A receptor in Salipro
Biological Source:
Source Organism:
Host Organism:
PDB Version:
Deposition Date:
2020-02-25
Release Date:
2020-12-23
Method Details:
Experimental Method:
Resolution:
2.80 Å
Aggregation State:
PARTICLE
Reconstruction Method:
SINGLE PARTICLE
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:5-hydroxytryptamine receptor 3A
Mutations:Insertion A277
Chain IDs:A, B (auth: C), C (auth: D), D (auth: B), E
Chain Length:538
Number of Molecules:5
Biological Source:Mus musculus
Ligand Molecules
Primary Citation
Asymmetric opening of the homopentameric 5-HT 3A serotonin receptor in lipid bilayers.
Nat Commun 12 1074 1074 (2021)
PMID: 33594077 DOI: 10.1038/s41467-021-21016-7

Abstact

Pentameric ligand-gated ion channels (pLGICs) of the Cys-loop receptor family are key players in fast signal transduction throughout the nervous system. They have been shown to be modulated by the lipid environment, however the underlying mechanism is not well understood. We report three structures of the Cys-loop 5-HT3A serotonin receptor (5HT3R) reconstituted into saposin-based lipid bilayer discs: a symmetric and an asymmetric apo state, and an asymmetric agonist-bound state. In comparison to previously published 5HT3R conformations in detergent, the lipid bilayer stabilises the receptor in a more tightly packed, 'coupled' state, involving a cluster of highly conserved residues. In consequence, the agonist-bound receptor conformation adopts a wide-open pore capable of conducting sodium ions in unbiased molecular dynamics (MD) simulations. Taken together, we provide a structural basis for the modulation of 5HT3R by the membrane environment, and a model for asymmetric activation of the receptor.

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Primary Citation of related structures