6Y3I image
Deposition Date 2020-02-18
Release Date 2021-02-17
Last Version Date 2024-05-15
Entry Detail
PDB ID:
6Y3I
Keywords:
Title:
NMR solution structure of the hazelnut allergen Cor a 1.0402
Biological Source:
Source Organism:
Method Details:
Experimental Method:
Conformers Calculated:
40
Conformers Submitted:
20
Selection Criteria:
structures with the lowest energy
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Major allergen variant Cor a 1.0402
Chain IDs:A
Chain Length:160
Number of Molecules:1
Biological Source:Corylus avellana
Ligand Molecules
Primary Citation
Inverse relation between structural flexibility and IgE reactivity of Cor a 1 hazelnut allergens.
Sci Rep 11 4173 4173 (2021)
PMID: 33603065 DOI: 10.1038/s41598-021-83705-z

Abstact

A major proportion of allergic reactions to hazelnuts (Corylus avellana) are caused by immunologic cross-reactivity of IgE antibodies to pathogenesis-related class 10 (PR-10) proteins. Intriguingly, the four known isoforms of the hazelnut PR-10 allergen Cor a 1, denoted as Cor a 1.0401-Cor a 1.0404, share sequence identities exceeding 97% but possess different immunologic properties. In this work we describe the NMR solution structures of these proteins and provide an in-depth study of their biophysical properties. Despite sharing highly similar three-dimensional structures, the four isoforms exhibit remarkable differences regarding structural flexibility, hydrogen bonding and thermal stability. Our experimental data reveal an inverse relation between structural flexibility and IgE-binding in ELISA experiments, with the most flexible isoform having the lowest IgE-binding potential, while the isoform with the most rigid backbone scaffold displays the highest immunologic reactivity. These results point towards a significant entropic contribution to the process of antibody binding.

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Primary Citation of related structures