6Y2J image
Deposition Date 2020-02-16
Release Date 2020-04-08
Last Version Date 2024-05-15
Entry Detail
PDB ID:
6Y2J
Keywords:
Title:
Crystal structure of M. tuberculosis KasA in complex with 4,4,4-trifluoro-N-(isoquinolin-6-yl)butane-1-sulfonamide
Biological Source:
Source Organism:
Method Details:
Experimental Method:
Resolution:
2.89 Å
R-Value Free:
0.16
R-Value Work:
0.11
Space Group:
P 31
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:3-oxoacyl-[acyl-carrier-protein] synthase 1
Gene (Uniprot):kasA
Chain IDs:A (auth: AAA), B (auth: BBB), C (auth: CCC), D (auth: DDD), E (auth: EEE), F (auth: FFF), G (auth: GGG), H (auth: HHH)
Chain Length:435
Number of Molecules:8
Biological Source:Mycobacterium tuberculosis H37Rv
Primary Citation
Exploring the SAR of the beta-Ketoacyl-ACP Synthase Inhibitor GSK3011724A and Optimization around a Genotoxic Metabolite.
Acs Infect Dis. 6 1098 1109 (2020)
PMID: 32196311 DOI: 10.1021/acsinfecdis.9b00493

Abstact

In the course of optimizing a novel indazole sulfonamide series that inhibits β-ketoacyl-ACP synthase (KasA) of Mycobacterium tuberculosis, a mutagenic aniline metabolite was identified. Further lead optimization efforts were therefore dedicated to eliminating this critical liability by removing the embedded aniline moiety or modifying its steric or electronic environment. While the narrow SAR space against the target ultimately rendered this goal unsuccessful, key structural knowledge around the binding site of this underexplored target for TB was generated to inform future discovery efforts.

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Primary Citation of related structures