ISDA: 6Y0X

Deposition Date 2020-02-10

Release Date 2021-02-17

Last Version Date 2024-10-16

Entry Detail

PDB ID:

6Y0X

Keywords:

ANTIBIOTIC

Title:

Fucosylated antimicrobial peptide SB6 in complex with the lectin LecRSL from Ralstonia solanacearum at 2.4 Angstrom resolution

Biological Source:

Source Organism:

Ralstonia solanacearum (Taxon ID: 305)
synthetic construct (Taxon ID: 32630)

Host Organism:

Escherichia coli 'BL21-Gold(DE3)pLysS AG'

Method Details:

Experimental Method:

X-RAY DIFFRACTION

Resolution:

2.43 Å

R-Value Free:

0.27

R-Value Work:

0.24

R-Value Observed:

0.24

Space Group:

P 41 21 2

Download Validation Report

Macromolecular Entities

Structures with similar UniProt ID

Protein Blast

Polymer Type:polypeptide(L)
Molecule:Fucose-binding lectin protein
Gene (Uniprot):E7Z57_08365, HF909_06975, LBW55_09125, LBW59_25430, RUN39_v1_50103
Chain IDs:A, B, E (auth: C), H (auth: D), J (auth: E), L (auth: F)
Chain Length:91
Number of Molecules:6
Biological Source:Ralstonia solanacearum

UniProt ID:A0A0S4TLR1 Pfam ID:PF07938

Protein Blast

Polymer Type:polypeptide(D)
Molecule:SB6
Chain IDs:C (auth: I), F (auth: K), N (auth: R)
Chain Length:12
Number of Molecules:3
Biological Source:synthetic construct

Protein Blast

Polymer Type:polypeptide(D)
Molecule:SB6
Chain IDs:D (auth: J), G (auth: L), I (auth: M), K (auth: O), M (auth: Q)
Chain Length:13
Number of Molecules:5
Biological Source:synthetic construct

Ligand Molecules