6Y0K image
Entry Detail
PDB ID:
6Y0K
Keywords:
Title:
Sulfite oxidase from Thermus thermophilus with coordinated phosphate
Biological Source:
PDB Version:
Deposition Date:
2020-02-08
Release Date:
2020-08-05
Method Details:
Experimental Method:
Resolution:
1.70 Å
R-Value Free:
0.19
R-Value Work:
0.16
Space Group:
P 61 2 2
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:Putaitve sulfite oxidase
Chain IDs:A (auth: AAA)
Chain Length:386
Number of Molecules:1
Biological Source:Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579)
Primary Citation
Structural evidence for a reaction intermediate mimic in the active site of a sulfite dehydrogenase.
Chem.Commun.(Camb.) 56 9850 9853 (2020)
PMID: 32716419 DOI: 10.1039/d0cc03634j

Abstact

By combining X-ray crystallography, electron paramagnetic resonance techniques and density functional theory-based modelling, we provide evidence for a direct coordination of the product analogue, phosphate, to the molybdenum active site of a sulfite dehydrogenase. This interaction is mimicking the still experimentally uncharacterized reaction intermediate proposed to arise during the catalytic cycle of this class of enzymes. This work opens new perspectives for further deciphering the reaction mechanism of this nearly ubiquitous class of oxidoreductases.

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