6XYX image
Deposition Date 2020-01-31
Release Date 2020-12-02
Last Version Date 2024-01-24
Entry Detail
PDB ID:
6XYX
Keywords:
Title:
Crystal structure of the BCL6 BTB domain in complex with the NCoR1 BBD corepressor peptide
Biological Source:
Source Organism:
Homo sapiens (Taxon ID: 9606)
Host Organism:
Method Details:
Experimental Method:
Resolution:
1.44 Å
R-Value Free:
0.19
R-Value Work:
0.16
R-Value Observed:
0.16
Space Group:
P 21 21 21
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:B-cell lymphoma 6 protein
Gene (Uniprot):BCL6
Chain IDs:A, B
Chain Length:126
Number of Molecules:2
Biological Source:Homo sapiens
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Nuclear receptor corepressor 1
Gene (Uniprot):NCOR1
Chain IDs:C (auth: D), D (auth: C)
Chain Length:17
Number of Molecules:2
Biological Source:Homo sapiens
Primary Citation
Functionalization of the BCL6 BTB domain into a noncovalent crystallization chaperone.
Iucrj 8 154 160 (2021)
PMID: 33708392 DOI: 10.1107/S2052252520015754

Abstact

The production of diffraction-quality protein crystals is challenging and often requires bespoke, time-consuming and expensive strategies. A system has been developed in which the BCL6 BTB domain acts as a crystallization chaperone and promiscuous assembly block that may form the basis for affinity-capture crystallography. The protein of interest is expressed with a C-terminal tag that interacts with the BTB domain, and co-crystallization leads to its incorporation within a BTB-domain lattice. This strategy was used to solve the structure of the SH3 domain of human nebulin, a structure previously solved by NMR, at 1.56 Å resolution. This approach is simple and effective, requiring only routine protein complexation and crystallization screening, and should be applicable to a range of proteins.

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Primary Citation of related structures