6XYE image
Deposition Date 2020-01-30
Release Date 2020-07-22
Last Version Date 2024-10-23
Entry Detail
PDB ID:
6XYE
Keywords:
Title:
Cryo-EM structure of the prefusion state of canine distemper virus fusion protein ectodomain
Biological Source:
Source Organism:
Host Organism:
Method Details:
Experimental Method:
Resolution:
4.30 Å
Aggregation State:
PARTICLE
Reconstruction Method:
SINGLE PARTICLE
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Fusion glycoprotein F2
Gene (Uniprot):F
Chain IDs:A, C, E
Chain Length:89
Number of Molecules:3
Biological Source:Canine morbillivirus
Polymer Type:polypeptide(L)
Molecule:Fusion glycoprotein F1
Gene (Uniprot):F
Chain IDs:B, D, F
Chain Length:438
Number of Molecules:3
Biological Source:Canine morbillivirus
Ligand Molecules
Primary Citation
Cryo-EM structure of the prefusion state of canine distemper virus fusion protein ectodomain.
J Struct Biol X 4 100021 100021 (2020)
PMID: 32647825 DOI: 10.1016/j.yjsbx.2020.100021

Abstact

Measles virus (MeV) and canine distemper virus (CDV), two members of the Morbillivirus genus, are still causing important global diseases of humans and animals, respectively. To enter target cells, morbilliviruses rely on an envelope-anchored machinery, which is composed of two interacting glycoproteins: a tetrameric receptor binding (H) protein and a trimeric fusion (F) protein. To execute membrane fusion, the F protein initially adopts a metastable, prefusion state that refolds into a highly stable postfusion conformation as the result of a finely coordinated activation process mediated by the H protein. Here, we employed cryo-electron microscopy (cryo-EM) and single particle reconstruction to elucidate the structure of the prefusion state of the CDV F protein ectodomain (solF) at 4.3 Å resolution. Stabilization of the prefusion solF trimer was achieved by fusing the GCNt trimerization sequence at the C-terminal protein region, and expressing and purifying the recombinant protein in the presence of a morbilliviral fusion inhibitor class compound. The three-dimensional cryo-EM map of prefusion CDV solF in complex with the inhibitor clearly shows density for the ligand at the protein binding site suggesting common mechanisms of membrane fusion activation and inhibition employed by different morbillivirus members.

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Primary Citation of related structures