6XWO image
Entry Detail
PDB ID:
6XWO
EMDB ID:
Title:
Structure of glutamate transporter homologue GltTk in the unsaturated conditions - inward-inward-outward configuration
Biological Source:
PDB Version:
Deposition Date:
2020-01-24
Release Date:
2020-03-04
Method Details:
Experimental Method:
Resolution:
3.39 Å
Aggregation State:
PARTICLE
Reconstruction Method:
SINGLE PARTICLE
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:Proton/glutamate symporter, SDF family
Chain IDs:A, B, C
Chain Length:430
Number of Molecules:3
Biological Source:Thermococcus kodakarensis (strain ATCC BAA-918 / JCM 12380 / KOD1)
Ligand Molecules
Primary Citation
Structural ensemble of a glutamate transporter homologue in lipid nanodisc environment.
Nat Commun 11 998 998 (2020)
PMID: 32081874 DOI: 10.1038/s41467-020-14834-8

Abstact

Glutamate transporters are cation-coupled secondary active membrane transporters that clear the neurotransmitter L-glutamate from the synaptic cleft. These transporters are homotrimers, with each protomer functioning independently by an elevator-type mechanism, in which a mobile transport domain alternates between inward- and outward-oriented states. Using single-particle cryo-EM we have determined five structures of the glutamate transporter homologue GltTk, a Na+- L-aspartate symporter, embedded in lipid nanodiscs. Dependent on the substrate concentrations used, the protomers of the trimer adopt a variety of asymmetrical conformations, consistent with the independent movement. Six of the 15 resolved protomers are in a hitherto elusive state of the transport cycle in which the inward-facing transporters are loaded with Na+ ions. These structures explain how substrate-leakage is prevented - a strict requirement for coupled transport. The belt protein of the lipid nanodiscs bends around the inward oriented protomers, suggesting that membrane deformations occur during transport.

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Primary Citation of related structures