6XWE image
Deposition Date 2020-01-23
Release Date 2020-08-12
Last Version Date 2024-10-23
Entry Detail
PDB ID:
6XWE
Keywords:
Title:
Crystal structure of LYK3 ectodomain
Biological Source:
Source Organism:
Host Organism:
Method Details:
Experimental Method:
Resolution:
1.49 Å
R-Value Free:
0.18
R-Value Work:
0.14
R-Value Observed:
0.14
Space Group:
P 21 2 21
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:LysM domain receptor-like kinase 3
Gene (Uniprot):LYK3
Chain IDs:A
Chain Length:213
Number of Molecules:1
Biological Source:Medicago truncatula
Ligand Molecules
Primary Citation
Ligand-recognizing motifs in plant LysM receptors are major determinants of specificity.
Science 369 663 670 (2020)
PMID: 32764065 DOI: 10.1126/science.abb3377

Abstact

Plants evolved lysine motif (LysM) receptors to recognize and parse microbial elicitors and drive intracellular signaling to limit or facilitate microbial colonization. We investigated how chitin and nodulation (Nod) factor receptors of Lotus japonicus initiate differential signaling of immunity or root nodule symbiosis. Two motifs in the LysM1 domains of these receptors determine specific recognition of ligands and discriminate between their in planta functions. These motifs define the ligand-binding site and make up the most structurally divergent regions in cognate Nod factor receptors. An adjacent motif modulates the specificity for Nod factor recognition and determines the selection of compatible rhizobial symbionts in legumes. We also identified how binding specificities in LysM receptors can be altered to facilitate Nod factor recognition and signaling from a chitin receptor, advancing the prospects of engineering rhizobial symbiosis into nonlegumes.

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Primary Citation of related structures